<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP00347
Description |
Uncharacterized protein (Fragment) |
Sequence | TSASQYGSIPMNLHNVKAGTPSPKWEGGALLSQVNNNSRFSHVTPQYSGSLYSAGNVRGSVPSSSLSSLSSATGRSANMMRLSASKSDQDLTSLRSPGSVEVASYTTIEDDQIRLLKDPAKDAISARSSQLLSPPRPTGTLVPGPSGKFTGPKSGTYSSVGGSMKVSAPNSWVTTPVSPAVDSAVHTTCQEVIPKHEKTSRKRTVSDMLNLIPSLQSLESGVKSCKRRRVLDVATSQEPSSEAVNLTETISRSCGYSYGKLIAEANTGNVPSSIYVSALLHVVRHCSLSIKHARLTSQMEALDIPYVEEVGLRNASSKIWFRLPFARGDSWQQICLRLGGPGSMYWDVKINDQHFRDLWELQKGSSTTPWGSGVRIANTSDVDSHIRYDPEGVVLSYQSVEADSIEKLVADIQRLSNARMFALGMRKLLGVKSDDRQEEVPVNSDVKAPTGAKYGAETVDKFAEQMRRIFRIEAVGLMSLWFSFGSGVLARFVVEWESGKEGCTMHVSPDQLWPHTKFLEDFINGAEVASLLDCIRLTAGPLHSLAAATRPARATPVSGMPGVTAALSSMSKQTGFVPSHGLLSSSSATHVGQGASIHAGNPALPSATGPPGSHNLQGAAMSATAVRGGPGIVPSSLLPIDVSVVLRGPYWIRIIYRKHFAVDMRCFAGDQVWLQPATPPKGGPSVGGSLPCPQFRPFIMEHVAQELNGLEPNLGGSQQTIGLGNSTTANSGSNAQLSAANGTRANLSSASISRAGIQVAPGNRLGNAQAGSSTLGASGPGLPLRRSPNTVVPAHVKGELNTAIIGLGDDGGYGGGWVPLVALKKVLRGILKYLGVLWLFAQLPDLLKEILGSILNNNEGALLNLDQEQPALRFFVGGYVFAVSVHRVQLLLQVLSVKRFHQQQQQQQQQQNSSTTQEELTQSEIGEICDYFSRRVASEPYDASRVASFITLLTLPISVLREFLKLIAWKKGLSQTQGGDIAPAQKPRIELCLENHTGFNMGENAGQSSVCKSNIHYDRPRNSVDFGLTVVLDPAHIPHINAAGGAAWLPYCVSVRLRYSFGENSHVSFLGMEGSHGGRACWLQKDDWDKCRQRVSRTAETSSAGDATQGRLRAVADNVQRALHICLQGLRDSSGTGSSGVL |
Length | 1142 |
Position | Tail |
Organism | Eucalyptus grandis (Flooded gum) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
rosids> malvids> Myrtales> Myrtaceae> Myrtoideae> Eucalypteae> Eucalyptus.
|
Aromaticity | 0.06 |
Grand average of hydropathy | -0.210 |
Instability index | 48.33 |
Isoelectric point | 9.09 |
Molecular weight | 122203.83 |
Publications | PubMed=24919147
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Function
Annotated function |
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GO - Cellular Component | core mediator complex GO:0070847 IBA:GO_Central
mediator complex GO:0016592 IBA:GO_Central
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GO - Biological Function | transcription coregulator activity GO:0003712 IBA:GO_Central
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GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IBA:GO_Central
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Interaction
Repeat regions
Repeats |
>MDP00347
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 136.61| 33| 34| 565| 597| 1
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51- 73 (26.62/ 8.17) ..LYSAGNVRGSVPSSSLSSLS.SAT........
565- 597 (58.98/26.41) AALSSMSKQTGFVPSHGLLSSS.SATHVGQGASI
602- 632 (51.00/21.91) PALPS...ATGPPGSHNLQGAAmSATAVRGGPGI
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 397.06| 113| 356| 654| 779| 2
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656- 779 (185.65/125.63) Y.RKHFAVDMrcfaGDQVWLQPATPPKGGpSVGGS..LP.C..PQFRPFIMEHVAQELNGLEPNLGG....SQ...Q...TIGLGNSTTANSGSNAQLSAANGTRANLSSA..SISRAGIQVAPGNRlgnaqaGSSTLGASG
955- 1015 (46.92/16.79) .....................................LP.I..SVLREF.LKLIAWK.KGLSQTQGGdiapAQ...KpriELCLENHTGFNMGENAGQSSV..CKSNI..................................
1017- 1140 (164.48/86.08) YdRPRNSVDF....GLTVVLDPAHIPHIN.AAGGAawLPyCvsVRLRYSFGENSHVSFLGMEGSHGG....RAcwlQ...KDDWDKCRQRVSRTAETSSAGDATQGRLRAVadNVQRALHICLQGLR......DSSGTGSSG
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 74.46| 14| 39| 124| 137| 3
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124- 137 (23.04/10.65) ISARSSQLLSPPRP
142- 155 (25.00/12.24) VPGPSGKFTGPKSG
166- 179 (26.42/13.40) VSAPNSWVTTPVSP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 188.94| 60| 356| 454| 519| 4
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454- 519 (94.80/78.72) YGAETVDKFAeqMRRIFR..IEAVGLmsLW.FSFGSGVLARFVVEWESGKEGCTMHVspDQLWPHTKFL
813- 875 (94.14/59.64) YGGGWVPLVA..LKKVLRgiLKYLGV..LWlFAQLPDLLKEILGSILNNNEGALLNL..DQEQPALRFF
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 96.25| 30| 31| 224| 254| 5
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224- 254 (45.27/41.75) SCKRrRVLDVATSQEPSSEAVNLTETISRSC
257- 286 (50.98/41.19) SYGK.LIAEANTGNVPSSIYVSALLHVVRHC
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 119.32| 35| 344| 12| 49| 6
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12- 49 (60.24/41.59) NLHNVKAGTPSPKWEGGAllsQVNNNSRF.SHVTPQYSG
357- 392 (59.08/33.79) DLWELQKGSSTTPWGSGV...RIANTSDVdSHIRYDPEG
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