<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP00334

Description Uncharacterized protein
SequenceMASSQLLADHAAAAAGTASVAVAIDRDKNSPHAVRWAIDHLGVSGLVMALIHVRHKNSHHIASGTDVVGDPVDGDSRDLFVMYRGYSARKRVQIKEVVVEENDVAKGLLEYIANNCITSVVMGAASRNTLARKLKYTDVSTSVSKSAPDFCSVYVISKGKVVSVRQARRPVVNTATPPRQPSSRARNSTSDESDISGSLSLGSMDFGDQKFDFSMVESDSPSPSSIAQSSRDLEAEMKRLKLELKQTMDMYSTACKEALSAKKQAEELHLLKIQEVRKFEEARHAEEAALALADMEKAKCKAAIEAAEKAQKLAEMEAQRRRQAEIKAKLESKEKVRALSALHQNDSRYRRYTIEEIEEATDRFSKTNKIGEGGYGPVYKGKLDHTSVAIKVLRPDAVQGKRQFHQEVEVLSCMRHPNMVLLLGACTEYGCLVYEYMDRGSLEDRLFRKGKTPPISWQKRFDIAAEIATALLFLHQSKPEPLVHRDLKPANILLDRNYKSKISDVGLARLVPPAVADSVTQFHMTAAAGTFCYIDPEYQQTGKLTTKSDVYSFGIMLLQIITVQPAMGLSHHVRTAIEKGTFEEMLDPAVPDWPVEEALAFAKLALMCAELRKKDRPDLGTVVLPELNRLRDFGNLLNVVCKK
Length643
PositionTail
OrganismEucalyptus grandis (Flooded gum)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Myrtales> Myrtaceae> Myrtoideae> Eucalypteae> Eucalyptus.
Aromaticity0.06
Grand average of hydropathy-0.329
Instability index42.98
Isoelectric point8.66
Molecular weight71242.88
Publications
PubMed=24919147

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP00334
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      69.06|      21|     130|     338|     374|       1
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  338-  358 (34.50/47.51)	ALSALHQNDSRYRRYTIEEIE
  389-  409 (34.56/13.46)	AIKVLRPDAVQGKRQFHQEVE
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     212.16|      65|     510|      10|      75|       2
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   10-   75 (107.07/84.84)	HAAAAAGTASVaVAIDRDKNSPHAVRWAIDHLGVSGLVMALIHVRHKNSHH....IASGT.DVVGDPVDGD
  523-  592 (105.09/78.38)	HMTAAAGTFCY.IDPEYQQTGKLTTKSDVYSFGIMLLQIITVQPAMGLSHHvrtaIEKGTfEEMLDPAVPD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     100.01|      33|      43|     172|     206|       4
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  172-  206 (52.26/37.87)	VNTATPprQPSSRARNSTSDESDISG.SLSL.GSMDF
  216-  250 (47.75/27.87)	VESDSP..SPSSIAQSSRDLEAEMKRlKLELkQTMDM
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      68.31|      17|      18|     280|     296|       5
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  263-  275 (14.80/ 6.40)	...KQAEELHL.LKIQE
  280-  296 (27.90/18.46)	EEARHAEEAALALADME
  301-  317 (25.62/16.36)	KAAIEAAEKAQKLAEME
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP00334 with Med32 domain of Kingdom Viridiplantae
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