<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP00319

Description Uncharacterized protein
SequenceMHQFWLHLKVVLTPCQNREDQTAEAIVEVPTNAPSPTTPALGAGKSVFLKSRSATVQRSGTAKLSNPFQDLMRRAFSLNADRHAVRPMVSPSPHSTPSDQPNVECMLERQDTSQELATSPSHHLQLIWSVYHTGHSSLSNTLLEEELEKVQDQQNKVMGELHSALEEKLRLESQFAETNERRKELELKIIAANEMVQIFRQERELLHIELDNALQKAEEVSRIKGDSSGTMYFSEFSITEIKEAVQNFDPALKIGEGGCGTVYRGFLRHTLVAIKIIKFHSMHSSQEFQQEVKVLSKVRHPNLITLIGACPEPCTLVYEYIPNGSLEDWLRSSDRVKQLPWQARLRIATELCSVLAFLHSWKPSIVHGDVKPGNILLDAHFVSKLSDFGICRLLSSGERSSNNTTAVHLTNPKGTFGYMDPELLVEGNLTIKSDVYSFGIILLELLTKRPTSGIANVVRRAISAGTLETILDPSAGGWPYMLAKDLAHLALRCCEMSRRNRPDLRSDVWTVLQSISASCQ
Length520
PositionTail
OrganismEucalyptus grandis (Flooded gum)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Myrtales> Myrtaceae> Myrtoideae> Eucalypteae> Eucalyptus.
Aromaticity0.06
Grand average of hydropathy-0.280
Instability index51.44
Isoelectric point6.56
Molecular weight58206.81
Publications
PubMed=24919147

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP00319
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     107.49|      33|      48|     359|     393|       1
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  359-  393 (53.35/49.75)	HSWKPSIVHGDVKPgNILLDAHFVSKlSD...FGICRL
  408-  443 (54.14/39.56)	HLTNPKGTFGYMDP.ELLVEGNLTIK.SDvysFGIILL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      95.57|      23|      66|      94|     116|       2
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   94-  116 (39.00/22.33)	HSTPSD...QPNVECML.ERQDT.SQEL
  135-  161 (26.55/13.19)	HSSLSNtllEEELEKVQ.DQQNKvMGEL
  162-  185 (30.02/15.74)	HSALEE...KLRLESQFaETNER.RKEL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      38.01|      12|      48|     186|     199|       3
---------------------------------------------------------------------------
  186-  197 (18.86/16.77)	ELKIIAANEMVQ
  204-  215 (19.15/ 8.11)	ELLHIELDNALQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      91.48|      28|      49|     231|     259|       4
---------------------------------------------------------------------------
  231-  259 (46.35/32.97)	MYFS.EFSiTEIKEAVQNFDPALKIGEGGC
  282-  310 (45.13/27.55)	MHSSqEFQ.QEVKVLSKVRHPNLITLIGAC
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP00319 with Med32 domain of Kingdom Viridiplantae
Unable to open file!