<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP00314

Description Uncharacterized protein
SequenceMAVVDRIVTLPEFRVPAVMPSFHRVAPELVTPDFEDVIYVAAGKDVKEGKAKLVWTVHQSRGNVKICIIHVLVPSKTIPMGGLGAEIPANLANEILLREHRENERINMHKILDTYLHVCTEMGLPAEKKYIESDSVQKGIVELIRLHGIRKLVMGAAADGRCFKKMTEIKSRKAIFVRDKAHISCQIRFICNGHLIHTREARTAEAIGEVPTDATSPTSPALGAGKSVFLKSRSDTQRSGTAKLSNPFQDLMRRAFSVNADRHSARPIASPPPDSTPSDQSNLECMLETHDTPQELTTSLSHHLQLIPSVYHTGHSSFSNTPDLDENGMREVLEEGAMTHAEEEVGIIEGRRKDPRKLLEELEKVQDHLNKVVEELRSALEEKLQLELNNALQKAEEMSRRKGDSSGTMYFSEFSMTEIKEAVQNFNPALNIGEGSCGTVYRGFLRHTPVAIKIIKSHSMHRSQEFQQEVDVLSKVRHPNLITLIGACPEPCTLVYEYIPNGSLEDWLRSSNRAKQLPWQARVRIATELCSVLAFLHSWKPSIVHGDVKPGNILLDAHLMSKLSDFGICRLLSSGERSSNNTTVVHLTNPKGTLGYMDPVFLVEGKLTIKSDVYSFGIILLELLTRRPALGIANAVRKAVSAGTLETILDPSAGEWPYMLAKELAHLALRCCEMSTRNRPDLRSDVWTVLQSIGASCQKT
Length700
PositionTail
OrganismEucalyptus grandis (Flooded gum)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Myrtales> Myrtaceae> Myrtoideae> Eucalypteae> Eucalyptus.
Aromaticity0.05
Grand average of hydropathy-0.259
Instability index48.42
Isoelectric point7.37
Molecular weight77840.60
Publications
PubMed=24919147

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP00314
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     304.58|     103|     249|      84|     198|       1
---------------------------------------------------------------------------
   84-  198 (155.65/144.33)	GAEIPANlaNEI.LLREHRENERI...NMHKILDTYLHVCTEMGLPAEKK.YIE.SDSVQKGiVELIRlhgiRKlvmGAAADGRCFKK..MTEIKSRKAIFVR..DKAHISCQIrfICNGHLIHT
  336-  448 (148.93/104.09)	GAMTHAE..EEVgIIEGRRKDPRKlleELEKVQDHLNKVVEELRSALEEKlQLElNNALQKA.EEMSR....RK...GDSSGTMYFSEfsMTEIKEAVQNFNPalNIGEGSCGT..VYRGFLRHT
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     119.65|      37|      61|     559|     597|       3
---------------------------------------------------------------------------
  559-  597 (57.75/48.30)	LMSKLSDFGICRLLSSGERSSNNTTVvhLTNPKGTLGYM
  623-  659 (61.90/44.37)	LLTRRPALGIANAVRKAVSAGTLETI..LDPSAGEWPYM
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP00314 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) NADRHSARPIASPPPDSTPSDQSNLECMLETHDTPQELTTSLSHHLQLIPSVYHTGHSSFSNTPDLDENGMREVLEEGAMTHAEEEVGIIEGRRK
259
353










Molecular Recognition Features






MoRF SequenceStartStop




NANANA