<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP00312

Description Uncharacterized protein
SequenceMLRSQDTFQELESFSTSLGHCPRWNESAYLTGHSSFFSTLGMNVNAGREVLEEEEVTWAKVEVDIIEGGQKDPSKMKYPLRSYAEKLEEELEKVKNQLDKVMEELHIAQYQKSQLKSQFVETDQSRKELEMKIILSEEIISTYRQERELLQNELDNALQEVEEVSRRQGQSSGTKYFSEFSMTEIKEAVQNFEPSLKIGEGGCGIVYKGFLRHMPVAIKTMKYQSMQGSQQFQQEVDVLSKVRHPNLIMLIGACAEPWTLVYEYFPNGSLEDWLHSSNRAKQLPWRARIRIATELCSVLAFLHSYKPHSIVHGDVKPGNILLDAHLGCKLSDFGICRLLSQGERSSNNTTVLYPTVVKGTLGYMDPEFLITRELTTKFDVYSFGIILLELLTRRPALGLVNEVQKAIDAGTLKAILDPLAGEWPDMLAKELTHLALRCCEMSRRNRPELGSDVWTVLQSIRASLGYT
Length467
PositionTail
OrganismEucalyptus grandis (Flooded gum)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Myrtales> Myrtaceae> Myrtoideae> Eucalypteae> Eucalyptus.
Aromaticity0.08
Grand average of hydropathy-0.352
Instability index48.63
Isoelectric point5.62
Molecular weight53187.19
Publications
PubMed=24919147

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP00312
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     181.65|      53|      53|      50|     102|       1
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   50-  102 (83.57/51.92)	VLEEEEVTWAKVEVDIIEGGQ.KDPSKMKYPL.RSYAE.KLEEELEKVKNQLDKVM
  104-  158 (69.90/42.32)	ELHIAQYQKSQLKSQFVETDQsRKELEMKIILsEEIIS.TYRQERELLQNELDNAL
  160-  191 (28.18/13.01)	............EVEEVSRRQ.GQSSGTKY.....FSEfSMTEIKEAVQN......
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      76.27|      23|      26|     373|     397|       6
---------------------------------------------------------------------------
  373-  395 (37.57/29.51)	ELTTKFDVYSFGIILLELLTRRP
  402-  424 (38.70/23.47)	EVQKAIDAGTLKAILDPLAGEWP
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP00312 with Med32 domain of Kingdom Viridiplantae
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