<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP00210

Description "Trans-2,3-enoyl-CoA reductase"
SequenceMIENRTGPQTIEFLTKRVVALGAVQTGQFLVDCETYMSVPQLGVQKTVHVLHNSEQPASVFAILESGSKVVPLIADGLFDLLMLKMTSIYTSKKQTKIEAKGPRFEIGDFCVKLGSVTMSQNFKGVLVEYRPCVVPGSAWELMREFLQGFLGSAVSNQAPQYLQMPNKYSPKAGSTRGMWKEKDLKDAIQAVKNGASVRKSSEMFKIPRKTLERKIKSGSDSKGPMGPSSSLGTANEDKLVDVIKEMHKHGLSLTTTELRSVAFNFAKHLGLKHRFNEEKEKAGYDWLQLFLSRHPELSVCKSEDVSPRGVRESDERDLPTDGHDTTISGTFRSVNSNTTVGEVKQQLHKLKVAPYVQRQSLRLEARGKALPDAETMKSLSLKAGEKLYYKDLGPQIGWKTVFLMEYAGPLVLYLWLYQRPWLFYGSLTTSYHRVANWAAVAWTVHYAKRLLETLFVHRFSHATMPLRNLFKNCTYYWLFAMYVGYHTNHPLYTPSSPLQFYIGAATFALCELGNLSIHLALKNLRPPGTTIRKVPMPTGNPFTALFNLVSCPNYTYEVGSWIGFSVMTSCLPAGLFTFAGAYQMTLWALGKHRLYKKEFSHYPKNRKAIIPFVL
Length615
PositionHead
OrganismOoceraea biroi (Clonal raider ant) (Cerapachys biroi)
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Endopterygota> Hymenoptera> Apocrita> Aculeata> Formicoidea> Formicidae> Dorylinae> Ooceraea.
Aromaticity0.11
Grand average of hydropathy-0.221
Instability index40.10
Isoelectric point9.56
Molecular weight69264.45
Publications
PubMed=24508170

Function

Annotated function 
GO - Cellular Component
integral component of membrane	GO:0016021	IEA:UniProtKB-KW
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
oxidoreductase activity, acting on the CH-CH group of donors	GO:0016627	IEA:InterPro
transcription coregulator activity	GO:0003712	IEA:InterPro

GO - Biological Process
lipid metabolic process	GO:0006629	IEA:InterPro
regulation of transcription by RNA polymerase II	GO:0006357	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP00210
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     102.47|      28|     164|     389|     416|       3
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  389-  416 (54.76/36.66)	YYKDLGPQIGWKTVF......LMEYAGPLVLYLW
  555-  588 (47.71/30.97)	YTYEVGSWIGFSVMTsclpagLFTFAGAYQMTLW
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP00210 with Med20 domain of Kingdom Metazoa
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