Description | Mediator of RNA polymerase II transcription subunit |
Sequence | MMGILYEKRPLKRPRLGPPDVYPQEPKQKEDELSLTNVKHGFTTIPQLADEFGTARSSNVTAAKVGAYFNAILAKKEELATMPDTGRKRQQINPKDNFWPVTARTKNGIEAWFKDLSGSKPLVALAKKAPNFNKKEEIFMMLCEYQVPMLRAAWFIKLSSAYTVAVSEAKIKKRQLPDPTTEWTGTLIKFLKDQLSKLQEYYHMGNHAASTGNNNSTTNSSCNSSNGTAGTNNSNNNSNSSNNNSVNGNNASNSNGSATNNQPPTPTLSSQPATGTTMNEEHKLALKQWHYCIQLAKYMFEEGLLDRQELLQWILELLDKIRSSPSEDGILKLLLPLALQYLEEFIQSELLARRLAYLCCRKMAHMCNNVESNANPQSPSIVKNEVNGSKEQAAVAAQGPLNPLIIAFNDYLTCSHHRDVVYSLATIIQVITLECPTALVWNSVGEGKAPSVLNGSPLDYLPCPPAALPCPPASSGNPTMKQLKVAQENIRARSQAAEGRWSCDKWQQSSAGTTTTKVLAALDALDRHSFDRMDAANSLDTLYTKIFTPPPKDTSNERDAKTEYNPQQDSAVVEILCEWAVSAERWGEHRAMAVAKLLEKRQSEATGETNDNDDKDSMCSNGSPPVLPIFQPLLMKFLDVDAPVLDNTSTQSKAQFTNLVHLFSELIRHDVFSHDAYMCTLISRGDLIQGPVASKPGTPSNREPIDEDSLFPGIDLKPTKLEVSDHGRAMDYDDSKIDDDLDKLLQHIKEDQQNSMDAPDSPKEDALTGHGGHESLDSKMPSSHSRHLLYTTHFPLPQDETCSQHDCNQRHVLLYGVGRVRDEARHTVKKMTKEVCKLFGKKFSIDVAEGGKVKKHSRSEFNFEAVTMKFQNLSYFDQHVVTWQCATQVIEMLNTFALAGSSYLPVHEHVAFLFDLMELALNIYGLIDVCIQILKELPEVEAQLTARNSQLVRSYTTNLSLYVVGVLRRYHCCLLLSPEQTTAVFDLLCKVVKHVSNPSDCSSAERCVLAHLYDLYSTCSLLKTKSHGVEAFSNAYPKIRTTLYSTLQPTPSSHVYNSQFMVDIFSSLRRGGKIEPQWARQLNETPANRYSFVCNAIVAVCSETDNDKLNDVAITCAELTACCNTLNAEWLGVLMALCCSSNSSAFYIDVLNQVDVQDLSIHNSLAIFTSILIARHCFSLEDFVVHIALPSLVKTCNDGRGDIDIEAEAGARLTCHLLLRLFKTVECPQPALYSVSTSPHPLPSGNSRGYSIKLSCDRHLLAAAHNNIRVGPVLAVLKAILVVGDAAAAKQPPKKVDIPLSHSSKGGGPASVGVGVGVSSSGPGELSISHILGTSDILGGGDDLGLDLAMSSSNSSAGMTTENVKGFSDFAHHVLRQICSQEWVLERCLQNPEELCHQDMLLDNMLTLRQAQKLLHMICYPETPTEAFIDQKTHITNILENLEQWSLRMSWLDLQLMYKQFSPGSSELSQWLDTVAKAAIDVFQLNSILNSKPDKRSGSIWLVAPLVSKLPSAVQGRVLKVAGQVLESGNWSKTAGRERGKSKSPSLFNHQPFLSLVLTCLKGQDDQREGLLTSLHSQLSQFLNTSKEEKHIGSEDPKTREVLQDALQLRFSLVGGVFDTIQRNTTATTDWAILLVQLVSYGVIDLNNNSELFTTVIDMLATLIHSTLVSDSQSEKDENKKHYQNLMKKLKKELGDRNSPSIRFVRQLLPLPKLTMEVITCEPVGCLTDTKGNKIAGFDSIDKKQGLQVCDSQRVSAWELLEGHKNPAPLSWAWFRAVRLERRPLTYQNAHKLLRYHTHSQIRPASHYLDPPPLPPEDLEPDKKESEPGKADTPMSIDSPGRISSNVTNTGVSNAGTNGKGKAMKSKRHNRRTKGPATPTTPISQQMQQPPSQLQQMAFANQQAPVAQQPGMFTGQPQPQPQQQWYGNQTHVPAQQYGYGQQLPPTPVTGPRYERPGMNNQSKQALSNMLRLRLPSTQFMGSQQQPTAAPVAGPGAFQGMQRQQFIRQQLRAQHGAPGMNQQQGMFAQTQQQQQQQQQGMYAGIQQGMNQNYAGYGGQQMMQQQQQQQQQTPQQTQQQQQQQLLQQQQQQQGILNQQQQNMMFSNQQQMMGPQREYMPQQRMQPGAARPPYLQAPNVTMNAMGPMGGGVQNQPAPPYRQSAGKPGAVGVAGVGTTNVSLQQNQQFQQQQAINQQRMRQQMLAMQQQQQAQQQQQQAAQQQGGASNQLLRHLNQPPQHSYQHQPPPY |
Length | 2246 |
Position | Kinase |
Organism | Ooceraea biroi (Clonal raider ant) (Cerapachys biroi) |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Endopterygota> Hymenoptera> Apocrita> Aculeata> Formicoidea> Formicidae> Dorylinae> Ooceraea. |
Aromaticity | 0.06 |
Grand average of hydropathy | -0.500 |
Instability index | 50.51 |
Isoelectric point | 7.53 |
Molecular weight | 249169.41 |
Publications | PubMed=24508170 PubMed=30249741 |
Annotated function |
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro |
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro |
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro |
Binary Interactions |
Repeats | >MDP00205 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 5| 158.95| 21| 22| 2179| 2199| 1 --------------------------------------------------------------------------- 2028- 2046 (33.06/10.47) Q...TQQQ.QQ.QQQQGM.YAGIQQ 2047- 2068 (30.24/ 8.98) G...MNQNyAGYGGQQMMQQQQQQQ 2069- 2091 (32.40/10.12) Q.qtPQQT.QQQQQQQLLQQQQQQQ 2179- 2198 (32.67/10.26) ....LQQN.QQFQQQQAINQQRMRQ 2199- 2219 (30.58/ 9.16) QmlaMQQQ.QQAQQQQ...QQAAQQ --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 53.09| 18| 23| 770| 790| 2 --------------------------------------------------------------------------- 770- 790 (29.92/27.90) HGgheSL.DSKMPSSH...SRH.LLY 793- 815 (23.16/11.51) HF...PLpQDETCSQHdcnQRHvLLY --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 6| 146.36| 21| 24| 1882| 1902| 4 --------------------------------------------------------------------------- 1893- 1919 (21.43/ 6.01) QLQQM...AF..ANQ....qaPVAQQpgmfTGQPQ...P 1920- 1946 (26.54/ 9.57) QPQQQ...WY..GNQthvpaqQYGYG....QQLPP...T 1947- 1967 (22.64/ 6.85) PVTGP...RY..ERP......GMNNQ....SKQAL...S 1996- 2019 (24.53/ 8.17) AFQGMqrqQF..IRQ......QLRAQ....HGAPG...M 2097- 2117 (25.67/ 8.96) QQQNM...MF..SNQ......Q...Q....MMGPQreyM 2118- 2137 (25.56/ 8.89) PQQRM...QPgaARP......PY.......LQAPN...V --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 3| 65.76| 15| 15| 1303| 1317| 5 --------------------------------------------------------------------------- 1287- 1301 (18.38/ 8.37) AAAKQPPKKVDIPLS 1303- 1317 (25.87/15.56) SSKGGGPASVGVGVG 1319- 1333 (21.50/11.36) SSSGPGELSISHILG --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 3| 68.53| 15| 15| 327| 341| 6 --------------------------------------------------------------------------- 301- 317 (20.16/10.74) EEGLLdrQELLQWILEL 327- 341 (24.31/14.67) EDGIL..KLLLPLALQY 343- 357 (24.06/14.43) EEFIQ..SELLARRLAY --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 49.41| 13| 15| 1377| 1389| 7 --------------------------------------------------------------------------- 1377- 1389 (26.03/18.21) QICSQEWVLERCL 1394- 1406 (23.38/15.42) ELCHQDMLLDNML --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 43.87| 13| 15| 989| 1002| 8 --------------------------------------------------------------------------- 989- 1002 (21.86/19.88) CkVVKHVSN.PSDCS 1007- 1020 (22.02/13.92) C.VLAHLYDlYSTCS --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 46.49| 13| 15| 1122| 1134| 9 --------------------------------------------------------------------------- 1122- 1134 (26.11/17.62) CCNT.LNAEWLGVL 1138- 1151 (20.38/11.93) CCSSnSSAFYIDVL --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 55.44| 16| 19| 522| 540| 10 --------------------------------------------------------------------------- 497- 512 (31.70/15.72) AEGRWSCDKWQ.QSSAG 524- 540 (23.74/13.33) ALDRHSFDRMDaANSLD --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 41.08| 11| 19| 1443| 1453| 11 --------------------------------------------------------------------------- 1443- 1453 (23.79/12.86) EQWSLRMS....WLD 1459- 1473 (17.29/ 7.31) KQFSPGSSelsqWLD --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 89.28| 29| 46| 46| 80| 12 --------------------------------------------------------------------------- 46- 80 (39.63/48.31) PQlaDEFG..TARSSNvtaaKVGAYFNAILAKKEELA 94- 124 (49.65/38.98) PK..DNFWpvTARTKN....GIEAWFKDLSGSKPLVA --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 63.12| 17| 23| 725| 741| 13 --------------------------------------------------------------------------- 725- 741 (31.86/21.48) DHGRAMDYDDSKIDDDL 751- 767 (31.26/20.92) DQQNSMDAPDSPKEDAL --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 35.04| 10| 20| 1233| 1242| 14 --------------------------------------------------------------------------- 1233- 1242 (19.88/10.41) YSV..STSPHPL 1250- 1261 (15.16/ 6.11) YSIklSCDRHLL --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 41.62| 11| 22| 2141| 2151| 15 --------------------------------------------------------------------------- 2141- 2151 (22.40/14.72) AMGPMGGGVQN 2166- 2176 (19.23/11.41) AVGVAGVGTTN --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 41.13| 13| 17| 1498| 1512| 22 --------------------------------------------------------------------------- 1498- 1512 (19.50/15.73) GSIWLVAPLVskLPS 1516- 1528 (21.64/10.85) GRVLKVAGQV..LES --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) ASNQLLRHLN 2) MLRLRL 3) MMGILYEKRPLKRPRLG | 2223 1969 1 | 2232 1974 17 |
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