<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP00201
Description |
Mediator of RNA polymerase II transcription subunit 14 |
Sequence | MMETNAPQMDLRDVVSRCIERSYDSIRTLAAALPTMPSVTDRRTQTLAQLVDARIVFEKLLATTRWSVQTPIAEQCIEVHRHIKHFDDQFYETHDRLRHMHAALNELKVPHYDLNGAIDVLYGGSYSRLPRVIHHAMQPRRLPPIDEEHSIQEINDTIRFRMIEEIIPDQFTDITIADGCATTFVEGQFQFVFTVNGNEPDSLWRVLSVHTILTDRCARIKFCKGVGMNNLRVILANAPTAEHNDHLKNLVQKCVNNSSSPLVAACAVLLDFCSRMALQIVLAQGHGLAQRWPMVDFRPVADHALDILYWKGLVKAATAKRPASPSNADLDAAPLTSGAPPLMSTETLSVRLHSHAGKNPPRGGALFSIQLYPSPPPELLVLYPTLLEPLRVPTNLYKLSAEQVLLGALELHAASVLFCLERKLVLGATVPLHLMTGEAVSVVRSPRSFRISRMDSSGQAPLEVSFDVRSGRFVVLCLVGARSRLVDSAVNQLETVLNTQCKVQLPRASEASIFPSHVGSGGGGTTRMLALEFDDESVVHKALAFALREIVAFELTCFAASCANVEVQRHVQINWDKYINFRQQTGNSIDSLSLSPHALFFQIVRNKESSGYLVVEFDRLADMESDIAHEDDWVRSPAFSLLQLQTSTIPCAVQFFQRFPAFRKDAIPMPPTPPASITPPSATPPSKKRKLAVDVTLPFVSNLFLHVISLCHERIQLQHYVNFARRRRVKIKYAGQGGTALAGVTTGEQIVSFPFPDRIPITPLNIKAVHGHLRKCGGFEMCVQLVAAPFDFIIPSSGTPAPTSASSSTSHSATSSGNLIFRYPHVQKFQPDNPLETFMAELITRVKPMADFGVKLQRTLSAVGRYSSSSEGIRDHFYVERADPFGFVLACRTSNPKRCVAAGSTADNLITYRVTIEYSSNPNSRFVLSSSHQAEHPLLNFIQTAFNLHMDSAQLLEALERTTIPLGILSSAVSSQLISAKCYRHDNAQDKLPSSGGPASHGGGMGKKGGKGGKGMRLGYKVKLPGEEKGYYAEKSYGGDDKSFVPAELLLIPRSQNHIRLTYADRCGIDIYFLEVSAITTNVPVFCHESSHD |
Length | 1093 |
Position | Tail |
Organism | Aphanomyces invadans |
Kingdom | Oomycetes |
Lineage | Eukaryota> Sar> Stramenopiles> Oomycota> Saprolegniales> Saprolegniaceae>
Aphanomyces.
|
Aromaticity | 0.08 |
Grand average of hydropathy | -0.102 |
Instability index | 44.56 |
Isoelectric point | 8.41 |
Molecular weight | 120673.94 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU365082
|
GO - Cellular Component | mediator complex GO:0016592 IEA:UniProtKB-UniRule
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:UniProtKB-UniRule
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP00201
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 41.33| 10| 86| 668| 679| 1
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668- 679 (18.98/16.51) PMPPTPPasITP
754- 763 (22.35/12.29) PFPDRIP..ITP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 213.52| 68| 87| 153| 225| 3
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153- 225 (100.79/81.60) EINDTIRfRMIEEIIPDQFTDITIAdgCATTF...VEGQFQFVFTvNGNEPDSLWRVLSVHTIlTDRCARIKFCKG
242- 312 (112.73/70.76) EHNDHLK.NLVQKCVNNSSSPLVAA..CAVLLdfcSRMALQIVLA.QGHGLAQRWPMVDFRPV.ADHALDILYWKG
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 118.58| 35| 485| 70| 104| 5
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70- 104 (66.74/45.82) TPIAEQC..IEVHRHIK.......HFDDQFYETHDRLRHMHAAL
556- 599 (51.84/33.91) TCFAASCanVEVQRHVQinwdkyiNFRQQTGNSIDSLSLSPHAL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 80.09| 23| 93| 787| 809| 6
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787- 809 (41.43/21.97) AAPFDFIIPS.SGTPAPTSASSST
882- 905 (38.66/20.04) ADPFGFVLACrTSNPKRCVAAGST
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 50.08| 16| 281| 107| 123| 7
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107- 123 (26.26/23.59) LKVPH..YDLNgAIDVLYG
390- 407 (23.82/14.97) LRVPTnlYKLS.AEQVLLG
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