<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP00158

Description Uncharacterized protein
SequenceMAMVEIQQQNNRIRYPEIDTSNLNLSSSGSTRSQIMGELEVPKTTPYLALQDDVMFVALGKDVKEGATVLMWALHNSRGKKIFILHVHQPAQKMPMMGGKVSISLVDEDQVKAYHAKERLEMHKILDKYTRTCDRAGVRAEKLYIEMDSIEKGIVRLITEQGIKWLVMGAAANKHYSRKMKEPRSKKATHVCAEAPSSCHIWFICKGSLIHTRESKVQESPNAKEVAHSLRSRSGAEGESNQMGLRSTGFNNRMFSSEEPPNGFAWMSPESSLNREGNSDWDSLSRGSPSVNSRISTCSSSEIIENSSALITVPCTQENEIGSGSPIASTAIEGNTNDELYDRIEQFMVEAENSRKEAYEESIRRKKAEKDGIDFIRRAKASEVLYVEELRRRKESEEALARDRKETERLQWELNGIMEELRVALDQKYSLECQIADSDRMVDELEQKMFSAVDLLQKYKQERDELQVDLDNALKVAEELRKKQAEVASSSSKSQFFSEFFYWEIEGATSNFSQSLKIGQGVYGSIYRGNLRHTQVVIKMLHSDTLQGPYEYQHEVSILSKLRHPNIVTLIGACPEAWSLIYEYLPNGNLEDRLNCKNNTPPLSWKTRIRIAAELCSALIFLHSCRPNGIVHGDLNPGSILLDENFVSKLSHFGVSRELNKDKTSDNNTTLCHRADPKGTFIYIDPEFLLTGELTPKSDVYSFGVILLRLLTGRPAIGLTNDVQVALDKGTLKEVLDAAAGDWPFVQAKQLAHLALSCADMNSGFRPDLASEVWRVLEPMKVSCGVTSLRFGSEESHHIPAYFVCPIFQEIMQDPVLAADGFTYESEALKGWLESGHDTSPMTNLKLPNCNLVPNHALRSAIQEWLQQS
Length869
PositionTail
OrganismErythranthe guttata (Yellow monkey flower) (Mimulus guttatus)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> lamiids> Lamiales> Phrymaceae> Erythranthe.
Aromaticity0.07
Grand average of hydropathy-0.451
Instability index50.93
Isoelectric point5.84
Molecular weight97786.76
Publications
PubMed=24225854

Function

Annotated function Functions as an E3 ubiquitin ligase. 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP00158
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     115.99|      30|      36|     345|     375|       1
---------------------------------------------------------------------------
  345-  370 (34.47/19.82)	............EQF.......................MVEAENSRKEAYEESIR.RKKAEK
  371-  409 (36.91/24.21)	DGIDfirrakasEVL.......................YVEELRRRKESEEALARdRKETER
  415-  463 (26.21/13.65)	NGI............meelrvaldqkyslecqiadsdrMVDELEQKMFSAVDLLQ.KYKQER
  464-  489 (18.40/ 7.52)	DELQ....vdldNAL.......................KVAEELRKKQAEVAS.........
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      85.66|      26|      36|     165|     190|       2
---------------------------------------------------------------------------
  165-  190 (45.64/29.01)	WLV.MGAAANKHYSRKMKEPRSKKATH
  202-  228 (40.02/24.59)	WFIcKGSLIHTRESKVQESPNAKEVAH
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      72.13|      22|      36|     282|     303|       4
---------------------------------------------------------------------------
  282-  303 (36.21/23.38)	DSLSRGSPSVNSRISTCSSSEI
  319-  340 (35.92/23.13)	NEIGSGSPIASTAIEGNTNDEL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     120.97|      38|     536|     233|     281|       6
---------------------------------------------------------------------------
  233-  281 (57.23/62.17)	RSGAEgESNQMglrSTGFNNRMFSS..EEP...PNGFAWMSpesslnrEGNSDW
  790-  832 (63.74/39.57)	RFGSE.ESHHI...PAYFVCPIFQEimQDPvlaADGFTYES.......EALKGW
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP00158 with Med32 domain of Kingdom Viridiplantae
Unable to open file!