<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP00155

Description Uncharacterized protein
SequenceMVPKQLIVAVEGTAAIGPFWQTIVSDYLDKIIRSFCGNEPTGQKPATTHFELSLVMFNAHGSYSACLVQRSGWTKDMDIFFQWLSAIPFAGGGFNDAAIAEGLSEALMMFSSPKGNQNQNVEGQRHCILIAASNPYPLPTPVFRPQIQNPEKNDGVESQPDNRLSDAETLAKSFAQCAVSLSVICPKQLPKLRGIFNAGKRNPRAPDPPVDNNKNPHFLVLISENFMEARSCLSRSGITSLPPNQIPVKMDVTPAPPPISGPPPVSIPAVNGSLLARQPVPAANIPPAIVKLEPPTIAPSMTGPTFPHISSIPRAVPQTVPTMQTSSPISTPQEVIPINENIPEVKPLVASSAPPIRPAGGAAANVRILNDMAQARQALAAAAAGGGGGASIGIPSMGGGTTMLSNMISSGMMTSSSMSSGPSIVTSISGPLPMSANGQVAQNNSGNSGIAMSSQPLSGLQGNVGPGQTGNIPVVPQMVQTGMGMNANMMSGGGGASGMSQQGQPPGGMNSNNVVNTLNQQTSATMQSAQSKYVKVWEGNLSGQRQGQPVFITRLEGYRSASASETLAANWPSTMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKAHRLIGMLFPGQQQQQMQVQLQQQQMQVQLQQQQIQQQQQPIMQIQQQQQQQQQQQQQQQQQMPQMQQQQNQQQMQQQQNQQQMNQAYMSQGGGQRSQIMSQGGQASSQGPPPTMPGGPFIN
Length757
PositionUnknown
OrganismErythranthe guttata (Yellow monkey flower) (Mimulus guttatus)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> lamiids> Lamiales> Phrymaceae> Erythranthe.
Aromaticity0.04
Grand average of hydropathy-0.359
Instability index59.11
Isoelectric point9.19
Molecular weight80799.06
Publications
PubMed=24225854

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP00155
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     122.04|      22|      22|     680|     701|       1
---------------------------------------------------------------------------
  656-  678 (39.66/12.05)	LQQQQMQVQLQQQQiQQQQQPI..M
  680-  701 (49.08/16.57)	IQQQQQQQQQQQQQ.QQQQMPQ..M
  703-  724 (33.30/ 8.99)	..QQQNQQQMQQQQ.NQQQMNQayM
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      92.29|      19|      20|     246|     264|       2
---------------------------------------------------------------------------
  246-  264 (36.92/15.49)	IPVKMDVTPAPPPISGPPP
  297-  314 (28.87/10.47)	IAPSMT.GPTFPHISSIPR
  316-  334 (26.50/ 9.00)	VPQTVPTMQTSSPISTPQE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     174.48|      36|      46|     492|     527|       3
---------------------------------------------------------------------------
  360-  398 (26.38/ 6.04)	GGAAANvRILNDMAQarQALAAAAagGG.........GGASiGIPSMG...
  440-  473 (43.02/14.79)	..VAQN.NSGNSGIA..MSSQPLS..GL.........QGNV.GPGQTGNIP
  481-  506 (53.10/20.10)	TGMGMN......AN.......MMS..GG.........GGAS.GMSQQGQPP
  507-  550 (51.98/19.51)	GGMNSN.NVVNTLNQ..QTSATMQ..SAqskyvkvweGNLS.G.QRQGQPV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      88.41|      21|      67|     267|     287|       5
---------------------------------------------------------------------------
  189-  216 (26.07/12.59)	LPKLR....GIFNAgkrnpRAPDPPVdnNKNP
  221-  243 (24.89/11.65)	LISENfmeaRSCLS.....RSGI..T..SLPP
  267-  287 (37.45/21.71)	IPAVN....GSLLA.....RQPVPAA..NIPP
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP00155 with Med25 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) MLSNMISSGMMTSSSMSSGPSIVTSISGPLPMSANGQVAQNNSGNSGIAMSSQPLSGLQGNVGPGQTGNIPVVPQMVQTGMGMNANMMSGGGGASGMSQQGQPPGGMNSNNVVNTLNQQT
2) PSMTGPTFPHISSIPRAVPQTVPTMQTSSPISTPQEVIPI
3) QQQQQQQQQQMPQMQQQQNQQQMQQQQNQQQMNQAYMSQGGGQRSQIMSQGGQASSQGPPPTMPGGPFIN
403
299
688
522
338
757










Molecular Recognition Features






MoRF SequenceStartStop




1) MNQAYM
719
724