<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP00147

Description Uncharacterized protein
SequenceMYNRTCEGLVHAQSKVQLLNSECVQEAQRVNAAQRREQSLRKAAALEKQKYLEAEKEVEMAKQLLAKETYERQMAELKAQKESLEKKRIVEALLSSDRRYKRYTMQDIQKATGFLAESNMIGEGAYGKVYKCSLDHTSVAVKILRPDAADRKEEFLKEVEVLSQLRHPHIVLLLGACPENGCLVYEYMENGNLEEHILRRKGRPPLPWPVRFRIAFEVACGLAFLHQSKPESIVHRDLKPGNILLDKNFVSKIGDVGLAKIISDVVPDSVTQYRDSVIAGTLFYMDPEYQRTGTLRPKSDLYSFGVIALQLLASRHPNGLITKFENAVSSGTLSEILDKSIIDWPLAQAEELAHIALKCCKLRCRDRPDLETEVLPILKRLAEFADSVSSTGRDHVPKHFYCPILQEIMDNPHIAGDGFTYEHGAIKAWLDRHDVSPVTREKLQNKTLTPNYMLHSAIQEWRKLKG
Length466
PositionTail
OrganismErythranthe guttata (Yellow monkey flower) (Mimulus guttatus)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> lamiids> Lamiales> Phrymaceae> Erythranthe.
Aromaticity0.07
Grand average of hydropathy-0.405
Instability index46.26
Isoelectric point8.37
Molecular weight52988.41
Publications
PubMed=24225854

Function

Annotated function Functions as an E3 ubiquitin ligase. 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein serine/threonine kinase activity	GO:0004674	IEA:UniProtKB-KW
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP00147
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     103.55|      30|      35|     398|     429|       1
---------------------------------------------------------------------------
  398-  429 (49.43/50.00)	KHFYCPILQEIMDNPHIAGDgFTYeHGAIKAW
  432-  461 (54.12/42.62)	RHDVSPVTREKLQNKTLTPN.YML.HSAIQEW
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      78.15|      27|      35|      19|      53|       2
---------------------------------------------------------------------------
   24-   53 (38.57/40.41)	VQEAQRVNAAQRREqslRKAAALEKQK.YLE
   58-   85 (39.58/20.23)	VEMAKQLLAKETYE...RQMAELKAQKeSLE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      51.50|      17|      35|     221|     237|       3
---------------------------------------------------------------------------
  221-  237 (31.06/22.36)	GLA.FLHQSKPESIVH.RD
  257-  275 (20.44/12.39)	GLAkIISDVVPDSVTQyRD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     140.69|      46|     135|     170|     220|       4
---------------------------------------------------------------------------
  170-  217 (77.15/57.50)	IVL.LLGACPENGcLVYEY...MENGNLEEhILRRKGRPPLP...WPVR.....FRIAFE
  307-  358 (56.53/31.28)	IALqLLASRHPNG.LITKFenaVSSGTLSE.IL...DKSIID...WPLAqaeelAHIALK
  362-  382 ( 7.01/ 7.10)	................................LRCRDRPDLEtevLPIL.....KRLA..
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP00147 with Med32 domain of Kingdom Viridiplantae
Unable to open file!