<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP00115

Description Uncharacterized protein
SequenceMPSTVIAPHSRNLTLDNVADNFPSGSDVNYYTTAKNNFNSFTSSSADDNNPSSDQASTSDNTPTKNQADVNFELEKMRVELRHIRGMYAMAQGEAIDTSRKLSGLQKRRLEEETNLRKISFKEKEAKELANKEKTRYEDAKKEAEFVNECAEREAEDRRDAEIWAARETKEKENLENALNGSLIQYRKFTWEEIVDATSSFSDDRKIGMGAYGTVYRSTFHYTTAAVKVLHSKDASRTKQFQQELDVLSKIRHPHLLILIGACIDHSCLVYEFMENGSLEDKLIRKKNKNNAPPLLWFDRFRIAWEVASALSFLHSAKPKGIVHRDLKPANILLDINNVSKIGDVGLSTVVNKDSISVSGLVGTLSYIDPEYQRTGVVAPESDVYAFGMVVLQLITGKPATALTHKVETAVDNDRLTELLDKKGGDWPIEETKVLARMALKCTELRRIDRPKMKGEVLPVLERLKDFAEKAPNLALVSAPTQFICPISNVVMSDPCVAGDGYTYDRGAIEKWIKVKDTSPVTDLQLPHKHLIPNYTLLSAIMEWKS
Length546
PositionTail
OrganismErythranthe guttata (Yellow monkey flower) (Mimulus guttatus)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> lamiids> Lamiales> Phrymaceae> Erythranthe.
Aromaticity0.07
Grand average of hydropathy-0.485
Instability index36.33
Isoelectric point6.36
Molecular weight61390.95
Publications
PubMed=24225854

Function

Annotated function Functions as an E3 ubiquitin ligase. 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein serine/threonine kinase activity	GO:0004674	IEA:UniProtKB-KW
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP00115
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      70.55|      21|      47|       2|      22|       1
---------------------------------------------------------------------------
    2-   22 (37.47/25.35)	PSTVIAPHSRNLTLDNVAD.NF
   51-   72 (33.08/21.54)	PSSDQASTSDNTPTKNQADvNF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      32.17|      11|      18|     123|     133|       2
---------------------------------------------------------------------------
  123-  133 (17.70/12.21)	EKE.AKELANKE
  143-  154 (14.47/ 8.56)	EAEfVNECAERE
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP00115 with Med32 domain of Kingdom Viridiplantae
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