<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP00067

Description Uncharacterized protein
SequenceMSAPAAQPTSSAEGQEEKDKSLLLRESDAAPERPLDIERLRRCIIEFVHENFLEVVFWQMQTANKDFDEMLGVQAVVLLNKMDEKERGVLLMELVTIVHEASLQWRQEYERVVDAILYYAHAAGVLSINMCVEGLALTADFTLRTIMDPQKWTFIEENIPLMDYKGVRSLFNHRAPYLPYKAELRAPQTYLLYTVIRQPRGKEVLSGLLRQVTHGRTQWDEILSVLISETMAEVQKLPEEVEIPRYQWENLMSIIMYGITQKHINLSRLLSLLSNVLVKTGYRRARDEVMWIMLQIAGTFQPHLQKEQVEEMARLYNLLFSDDVVWTGASDHPSQLVRFLAAACMWNILDGSEGLPPPSECLATQIEFVRSNTGPPDEAMQAVLDNAFRHESPISRNVHAIFQQRLDGQPTDEPHILPYGRAANNKLDAFDMQFLDALTLRAKINLLISTCFVSLHKVDRLPSPACVETCARILTSIEFDYGLTNFIAILNRSITAALSPAPADGLNHKDQCYMLLDLLCYRLPSIPMNFRAAMSHTHDPTPAGLRLCMTIHSAMAQQHVASNHGLYSAMEHTLMRQWAWNLLPDTISLAHLFVDNAFGNTLLNLNSWLVYNPMDNSRAGRLVICPEIVRMLLITMMRAMKIMGIESDPELMRINQVYTWAPSQLSSLPLTAQRTAITLEEDPAKAEAFQREVHTDFMQMRGQPEMSWMEYMSMPSRQPTILCVIFRYLIESPPEHQMLSPVIYQILDRQTCREHVLAVNALTDYIISQCSAEKNSEEFLPMMIRVLNMMVFHRHVMTFDRLLLSLVLHPATDHASQIAMVIVQALLNCTEINERIDFYCRYIPKRDVDAPEHFRRLAEYHRKFPEMTFAEMANRPPMMAEMVNPRAHYPIYYGSLIERLLPILDFTLARALELQVDNIFSTILTTCGPIYKFHPYPITFLYTILFCMHEQLGHHPRARQFVLAILCQGDQSSLTQSFINDNHQRVYSFEELVYELADRIITCSEFILTPPSYVAPDWRFAEYPPAAQALYLACIELLASPHTPEHIVPAMINLLVSSRAQPPRPYLMLNAIALLLTALPEAYCRVLQNEFLAVIDSGVLAEMTFEEIVFDEFEERQLLQMASRPLIVNVVAQAYWYHSNLTSLSKLISTFAGEVCSRANTENDLWYALRLVVPLLQRCYDWREKVKHEESLKVVSILYTKIGDITERYGDILHGDELCDLLYYFKYMFVGDFLRKEAEAAFPRFPPRMRERLKFYTSFSSNKEKDEDCAAKVSSVSRPDLATLLKTSRANAPDRPADTHVTSSAGDH
Length1308
PositionTail
OrganismAncylostoma ceylanicum
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Nematoda> Chromadorea> Strongylida> Ancylostomatoidea> Ancylostomatidae> Ancylostomatinae> Ancylostoma.
Aromaticity0.09
Grand average of hydropathy-0.078
Instability index49.18
Isoelectric point5.61
Molecular weight150021.75
Publications
PubMed=25730766

Function

Annotated function 
GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP00067
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     487.09|     189|     473|     123|     336|       2
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  123-  197 (55.31/36.24)	.....................................................................................................................................................AGV..................................................................................................................................................................................................................................................................................................................................lsinmcvegLALTADFTLRTI.MDPQKWTFIE.ENIPLMDYKGVRSLFNHRAPYLPYKAELRAPQTYLLYTVIR
  198-  336 (147.49/113.57)	QPRGKEVLSGLLRQVTHGRTQWDEILSVlisETMAE..VQKLPEEVEIPRYqWENLMSIIMYGITQKHI.NLSRLlsLLSNVLvktgyRRARDEVMWIMLQIAgtfQPHLQKEQVEEMARLYNLLFSDDVVwtGASDHPSQL......................................................................................................................................................................................................................................................................................................................................................................................................................
  668-  727 (44.25/12.82)	........................................................................................................................................................vrflaaacmwnildgseglpppseclatqiefvrsntgppdeamqavldnafrhespisrnvhaifqqrldgqptdephilpygraannkldafdmqfldaltlrakinllistcfvslhkvdrlpspacvetcariltsiefdygltnfiailnrsitaalspapadglnhkdqcymlldllcyrlpsipmnfraamshthdptpaglrlcmtihsamaqqhvasnhglysamehtlmrqwawnllpdtislahlfvdnafgntllnlnswlvynpmdnsragrlvicpeivrmllitmmramkimgiesdpelmrinqvytwapsqlssLPLTAQRTAITLeEDPAKAEAFQ.REVH.TDFMQMRG..QPEMSWMEYMS.MPSRQPTILCVIFR
  732-  896 (240.03/133.97)	SPPEHQMLSPVIYQILDRQTCREHVLAV...NALTDyiISQCSAEKNSEEF.LPMMIRVLNMMVFHRHVmTFDRL..LLSLVL.....HPATDHASQIAMVIV...QALLNCTEINERIDFYCRYIPKRDV..DAPEHFRRLaeyhrkfPEM..............................................................................................................................................................................................................................................................................................................................................................TFAEmANRPPM....MAEMVNPRAHYPIYYGSL.............
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      79.27|      23|     474|       2|      50|       3
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    2-   24 (38.06/32.84)	SAPAAQPTSSAEGQEEKDKSLLL
  493-  515 (41.20/10.81)	SITAALSPAPADGLNHKDQCYML
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      66.75|      18|      18|     528|     545|       4
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  528-  545 (34.20/18.52)	MNFRAAMSHTHDPTPAGL
  549-  566 (32.56/17.32)	MTIHSAMAQQHVASNHGL
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      63.18|      17|      18|     934|     951|       6
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  934-  951 (30.78/22.62)	HPYPITFLYTILfCMHEQ
  955-  971 (32.39/18.54)	HPRARQFVLAIL.CQGDQ
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      76.96|      17|      19|     375|     391|       7
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  357-  373 (26.52/16.55)	PPSECLATQ....IEFVRSNT
  375-  391 (28.60/18.48)	PPDEAMQAV....LDNAFRHE
  393-  413 (21.84/12.18)	PISRNVHAIfqqrLDGQPTDE
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      36.76|      12|      17|    1052|    1066|       8
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 1052- 1066 (16.89/16.76)	INLLVSSRaqpPRPY
 1072- 1083 (19.87/ 9.63)	IALLLTAL...PEAY
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP00067 with Med23 domain of Kingdom Metazoa
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