CoNCRAtlas


CoNCRAtlas ID CoMIRGB063
Mature miRNA sequence UCGGACCAGGCUUCAUUCCCc
Locus D02:66409665-66409852(+)
Alignment 
Displayed Location: CM018216.1:66409653-66409779 Strand: +
GAAAUGGGUUGUCUUUGAGAGGAAUGUUGGCUGGCUCGAUGCGACAGCUUUGAGAUUGUAAAGUGUGAUCAAAGUAAAAGGUAUCAUCGGACCAGGCUUCAUUCCCCUCAAACAUUUUCAUUUUUAA
((((((.......((((((.((((((..(.((((.((((((..((.(((((((...............))))))).....))..)))))).)))).)..)))))).)))))))))))))))).....
......................................................................................UCGGACCAGGCUUCAUUCCCC.................... gba-miR166g
....................GGAAUGUUGGCUGGCUCGAUG...................................................................................... gba-miR166g*
miRNA family miR166

Expression profile

Tissue specificity indexOvule: 0.0715; root: 0.2448; shoot apical: 0.3558; fiber: 0.0347; all tissues: 0.2931 | Tau: 0.5475

Additional Information


Overlapping Elements: No overlap molecule
Target lncRNA CoLNCGB27758, CoLNCGB27758, CoLNCGB08918, CoLNCGB23404, CoLNCGB23405, CoLNCGB28882, CoLNCGB27758, CoLNCGB27695, CoLNCGB09188, CoLNCGB09187
Target CDS GB_A05G1336, GB_D05G1338, GB_A13G1526, GB_A02G0792, GB_A06G0949, GB_A12G0899, GB_A05G0479, GB_A05G1054, GB_A06G1038, GB_A08G2365
sORF
Reference
PMID Title
25131375Small RNA and degradome profiling reveals a role for miRNAs and their targets in the developing fibers of Gossypium barbadense