CoNCRAtlas


CoNCRAtlas ID CoMIRGB054
Mature miRNA sequence UCGGACCAGGCUUCAUUCCCA
Locus D01:55640879-55640978(+)
Alignment 
Displayed Location: CM018215.1:55640860-55640997 Strand: +
AUGAAGCGAAAGGGUUGAUGGGAAUGUUAUUUGGCUCGAGGUCAUUUAGGGUUCGGCUAAUAUCUACAUGUGCAUACAUACAUAGCCCUAUAUGAUGUCGGACCAGGCUUCAUUCCCAUCAACCAAACACUUCCCCUC
)).))).)))).((((((((((((((...(((((.((((.(((((.(((((((..............(((((......)))))))))))).))))).)))).)))))...))))))))))))))............((
.................................................................................................UCGGACCAGGCUUCAUUCCCA.................... gba-miR166f
....................GGAAUGUUAUUUGGCUCGAGG................................................................................................. gba-miR166f*
miRNA family miR166

Expression profile

Tissue specificity indexOvule: 0.0389; root: 0.9159; shoot apical: 0.0206; fiber: 0.012; all tissues: 0.0125 | Tau: 0.977

Additional Information


Overlapping Elements: No overlap molecule
Target lncRNA CoLNCGB27758, CoLNCGB27758, CoLNCGB24851, CoLNCGB24852, CoLNCGB24853, CoLNCGB28882, CoLNCGB08702, CoLNCGB08703, CoLNCGB08704, CoLNCGB08705
Target CDS GB_A05G1336, GB_D05G1338, GB_A13G1526, GB_A02G0792, GB_A06G0949, GB_A12G0899, GB_A05G0479, GB_A05G1054, GB_A06G1038, GB_A08G2365
sORF
Reference
PMID Title
0NA