CoNCRAtlas


CoNCRAtlas ID CoMIRGB006
Mature miRNA sequence UGGAGGCAGCGGUUCAUCGAUC
Locus A03:21604170-21604287(-)
Alignment 
Displayed Location: CM018204.1:21604163-21604293 Strand: -
AAAAAAAGGGGUAAAGACACUGGAGGCAGCGGUUCAUCGAUCUCUUCCUGAGAAUUUUGUUGUGAGAAUAACACAAAUACAUGAAUCGAUCGAUAAACCUCUGCAUCCAGCGCCUUAACUCUCUUUUAUUU
((.(((((((((.(((.(.(((((.((((.((((.(((((((..(((.((...((((((((((....)))))).)))).)).)))..))))))).)))).)))).))))).).))).)).))))))).)))
....................UGGAGGCAGCGGUUCAUCGAUC......................................................................................... gba-miR162
.........................................................................................UCGAUAAACCUCUGCAUCCAGC.................... gba-miR162*
miRNA family miR162

Expression profile

Tissue specificity indexOvule: 0.2354; root: 0.2111; shoot apical: 0.2939; fiber: 0.0477; all tissues: 0.2118 | Tau: 0.3995

Additional Information


Overlapping Elements: No overlap molecule
Target lncRNA CoLNCGB14663, CoLNCGB00716, CoLNCGB12326, CoLNCGB05816, CoLNCGB05819, CoLNCGB22574, CoLNCGB02156, CoLNCGB16758, CoLNCGB15197, CoLNCGB15196
Target CDS GB_D11G2934, GB_A01G0603, GB_D01G0622, GB_A07G1450, GB_D07G1462, GB_A07G0670, GB_D11G0679, GB_A02G1754, GB_D03G0332, GB_D04G0431
sORF
Reference
PMID Title
0NA