CoNCRAtlas


CoNCRAtlas ID CoMIRGB095
Mature miRNA sequence UUUGGAUUGAAGGGAGCUCUA
Locus D09:44175267-44175489(+)
Alignment 
Displayed Location: CM018223.1:44175299-44175504 Strand: +
AAGGUGGGGGGUUAGGAAUGGAGCUCCUUGAAGUCCAAUAGAGUUUCUUGCUGGGUAUAUUGAGCUGCUUGGCUAUGGAUCCCACAGUCCUAUCCCAUGUUGGGAGGGAUAGGCUUGCGGCUUCCAUAUCUCAGGAGCUUCAUUACCUUUAAAGUUAGAUCCUUGUUUGGAUUGAAGGGAGCUCUACAUCUUUCUCCUUUCUCACU
..))).(((((..(((..(((((((((((..(((((((..(((..(((.((((((((....(((((.((.((.((((((..((.(((.((((((((.........)))))))).))).))..)))))).)).)).)))))...)))))....))).)))..)))..)))))))..)))))))))))..)))..)))))))))..))
.....................................................................................................................................................................UUUGGAUUGAAGGGAGCUCUA.................... gba-miR159b
....................GAGCUCCUUGAAGUCCAAUAG..................................................................................................................................................................... gba-miR159b*
miRNA family miR159

Expression profile

Tissue specificity indexOvule: 0.7524; root: 0.0792; shoot apical: 0.0163; fiber: 0.1482; all tissues: 0.0038 | Tau: 0.9177

Additional Information


Overlapping Elements: No overlap molecule
Target lncRNA CoLNCGB22043, CoLNCGB22043, CoLNCGB29395, CoLNCGB29396, CoLNCGB28105, CoLNCGB00087, CoLNCGB20266, CoLNCGB16700, CoLNCGB05481, CoLNCGB05482
Target CDS GB_D13G1660, GB_A13G1744, GB_A07G1647, GB_A08G1735, GB_A11G0278, GB_D11G0279, GB_D06G1449, GB_D13G1799, GB_A06G1571, GB_D06G1624
sORF
Reference
PMID Title
0NA