CoNCRAtlas


CoNCRAtlas ID CoMIRGB033
Mature miRNA sequence UUUGGAUUGAAGGGAGCUCUA
Locus A09:70184515-70184736(-)
Alignment 
Displayed Location: CM018210.1:70184524-70184729 Strand: -
AAGGUGGGGGGUUAGGAAUGGAGCUCCUUGAAGUCCAAUAGAGGUUCUUGCUGGGUAUAUUGAGCUGCUUGGCUAUGGAUCCCACAGUCCUAUCCCAUGUUGGGAGGGAUAGGCUUGCGGCUUCCAUAUCUCAGGAGCUUCAUUACCUUAAAAGUUAGAUCCUUGUUUGGAUUGAAGGGAGCUCUACAUCUUUCUCCUUUCUCACU
(((((((((((..(((..(((((((((((..(((((((..((((.(((.((((((((....(((((.((.((.((((((..((.(((.((((((((.........)))))))).))).))..)))))).)).)).)))))...)))))....))).))).))))..)))))))..)))))))))))..)))..)))))...((((.
.....................................................................................................................................................................UUUGGAUUGAAGGGAGCUCUA.................... gba-miR159a
....................GAGCUCCUUGAAGUCCAAUAG..................................................................................................................................................................... gba-miR159a*
miRNA family miR159

Expression profile

Tissue specificity indexOvule: 0.852; root: 0.0372; shoot apical: 0.019; fiber: 0.0912; all tissues: 0.0006 | Tau: 0.9566

Additional Information


Overlapping Elements: No overlap molecule
Target lncRNA CoLNCGB22043, CoLNCGB22043, CoLNCGB29395, CoLNCGB29396, CoLNCGB28105, CoLNCGB00087, CoLNCGB20266, CoLNCGB16700, CoLNCGB05481, CoLNCGB05482
Target CDS GB_D13G1660, GB_A13G1744, GB_A07G1647, GB_A08G1735, GB_A11G0278, GB_D11G0279, GB_D06G1449, GB_D13G1799, GB_A06G1571, GB_D06G1624
sORF
Reference
PMID Title
0NA