CoNCRAtlas


CoNCRAtlas ID CoMIRGB078
Mature miRNA sequence UUGACAGAAGAGAGUGAGCAC
Locus D05:4654906-4654995(+)
Alignment 
Displayed Location: CM018219.1:4654890-4655013 Strand: +
UCUUCUUUGGGACAUAGAAAUUGACAGAAGAGAGUGAGCACACAGAGGCACUUGUAUAAGGCUAUACUUUUGCUUUUGCGUGCUCACUUCUCUUUCUGUCAGUUUCCAGUGCCGGAAUUUGAUC
.......(((((((..(((((((((((((((((((((((((.((((((((...(((((....)))))...)))))))).)))))))).)))).)))))))))))))(((.(((((((..(((((
....................UUGACAGAAGAGAGUGAGCAC................................................................................... gba-miR156e
.................................................................................GCUCACUUCUCUUUCUGUCAGUU.................... gba-miR156e*
miRNA family miR156

Expression profile

Tissue specificity indexroot: 0.7573; shoot apical: 0.2355; fiber: 0.0001; all tissues: 0.0072 | Tau: 0.9199

Additional Information


Overlapping Elements: No overlap molecule
Target lncRNA CoLNCGB11381, CoLNCGB11381, CoLNCGB22348, CoLNCGB23736, CoLNCGB23735, CoLNCGB23734, CoLNCGB23733, CoLNCGB18061, CoLNCGB18060, CoLNCGB18059
Target CDS GB_D01G1853, GB_A03G1534, GB_D02G1688, GB_A01G1756, GB_D04G2127, GB_A04G1736, GB_A11G3648, GB_D11G3672, GB_D01G1531, GB_D04G1004
sORF
Reference
PMID Title
0NA