CoNCRAtlas


CoNCRAtlas ID CoMIRGB074
Mature miRNA sequence UCGGACCAGGCUUCAUUCCUC
Locus D04:53283243-53283389(-)
Alignment 
Displayed Location: CM018218.1:53283282-53283398 Strand: -
GAAAAUGGUAGAUUUUGAGGGGAAUGUUGGCUGGCUCGAAGCUUAAACAAAUACAGCUUCGGUUUCGGUUUAAGCUUCGGACCAGGCUUCAUUCCUCUCAAAAAUUUACGCAUGCAU
....((((((((((((((((((((((..(.((((.(((((((((((((.((..(......)..))..))))))))))))).)))).)..)))))))))).))))))))).)))...)
............................................................................UCGGACCAGGCUUCAUUCCUC.................... gba-miR166h
....................GGAAUGUUGGCUGGCUCGAAG............................................................................ gba-miR166h*
miRNA family miR166

Expression profile

Tissue specificity indexOvule: 0.0131; root: 0.8043; shoot apical: 0.0789; fiber: 0.0042; all tissues: 0.0995 | Tau: 0.9392

Additional Information


Overlapping Elements: No overlap molecule
Target lncRNA CoLNCGB27758, CoLNCGB27758, CoLNCGB08918, CoLNCGB23404, CoLNCGB23405, CoLNCGB28882, CoLNCGB27758, CoLNCGB27695, CoLNCGB09188, CoLNCGB09187
Target CDS GB_A05G1336, GB_D05G1338, GB_A13G1526, GB_A02G0792, GB_A06G0949, GB_A12G0899, GB_A05G0479, GB_A05G1054, GB_A06G1038, GB_A08G2365
sORF
Reference
PMID Title
No references available