CoNCRAtlas



CoNCRAtlas ID CoMIRGB051
Mature miRNA sequence UGACAGAAGAGAGUGAGCACU
Locus A13:102976102-102976194(-)
Alignment
Displayed Location: CM018214.1:102976085-102976208 Strand: -
CAAUGAGAACAAAGAGAGAUUGACAGAAGAGAGUGAGCACUCACAGGCAAUUGUAUGGAAAAGGCAUACCUUUAUCCGUGGUUGCUUACUUCUCUUCUGUCGGCUAUUUUCUUCUUCAUCAUCA
.(((((.....((((((((((((((((((((((((((((.((((.((.((..(((((.......)))))..)).)).)))).))))))).)))))))))))))....)))).)))).....)))
....................UGACAGAAGAGAGUGAGCACU................................................................................... gba-miR156c
..................................................................................UGCUUACUUCUCUUCUGUCGGC.................... gba-miR156c*
miRNA family miR156

Expression profile

Tissue specificity indexOvule: 0.0046; root: 0.1046; shoot apical: 0.1857; fiber: 0.0085; all tissues: 0.6966 | Tau: 0.8911
Tissue
Developmental Stage
Treatment

Additional Information


Overlapping Elements:
ChromosomeStartEndStrandMolecule
A13102972764102976604-CoLNCGB11396
A13102972766102976604-CoLNCGB11397
Target lncRNA CoLNCGB11381, CoLNCGB22348, CoLNCGB23736, CoLNCGB23735, CoLNCGB23734, CoLNCGB23733, CoLNCGB13001, CoLNCGB14267, CoLNCGB18061, CoLNCGB18060
Target CDS GB_A13G0912, GB_D13G0908, GB_D01G1853, GB_A03G1534, GB_D02G1688, GB_A01G1756, GB_D04G2127, GB_A04G1736, GB_A03G0850, GB_D03G1137
sORF
Reference
PMID Title
0NA