| CoNCRAtlas ID |
CoMIRGB014 |
|---|
| Mature miRNA sequence |
UUGACAGAAGAGAGUGAGCAC |
|---|
| Locus |
A05:5561300-5561388(+) |
|---|
| Alignment |
Displayed Location: CM018206.1:5561284-5561407 Strand: +
UCUUCUUUGGGACAUAGAAAUUGACAGAAGAGAGUGAGCACACAGAGGCACUUGUAUAAGGCUAUACUUCUGCUUUUGCGUGCUCACUUCUCUUUUUGUCAGUUUCCAGUGCCGGAAUUUGAUC
.......(((((((..(((((((((((((((((((((((((.((((((((...(((((....)))))...)))))))).)))))))).)))).)))))))))))))(((.(((((((..(((((
....................UUGACAGAAGAGAGUGAGCAC................................................................................... gba-miR156a
.................................................................................GCUCACUUCUCUUUUUGUCAGUU.................... gba-miR156a*
|
|---|
| miRNA family |
miR156 |
|---|
Expression profile
| Tissue specificity index | root: 0.6898; shoot apical: 0.3008; all tissues: 0.0094 | Tau: 0.8876
|
|---|
| Tissue |
|
|---|
| Developmental Stage |
|
|---|
| Treatment |
|
|---|
Additional Information
Overlapping Elements:
| sORF |
>CoMIRGB014:4-42 ORF1_CoMIRGB014:3:41
TTGACAGAAGAGAGTGAGCACACAGAGGCACTTGTATAA
>CoMIRGB014:35-88 ORF2_CoMIRGB014:34:87
TTGTATAAGGCTATACTTCTGCTTTTGCGTGCTCACTTCTCTTTTTGTCAGTTT
>CoMIRGB014:c85-2 ORF3_CoMIRGB014:84:1
CTGACAAAAAGAGAAGTGAGCACGCAAAAGCAGAAGTATAGCCTTATACAAGTGCCTCTGTGTGCTCACT
CTCTTCTGTCAATT
>ORF1_CoMIRGB014:3:41 unnamed protein product
MTEESEHTEALV
>ORF2_CoMIRGB014:34:87 unnamed protein product, partial
MYKAILLLLRAHFSFCQF
>ORF3_CoMIRGB014:84:1 unnamed protein product, partial
MTKREVSTQKQKYSLIQVPLCAHSLLSI
Check Peptide activity
|