Plant tRF Database

               Statistics

Arabidopsis thaliana


Total tRNA genes in genome 700
Total tRNA genes that generate tRFs 690
tRNA genes generate tRF-5 687
tRNA genes generate tRF-3 643
tRNA genes generate tRF-1 158
tRNA genes generate tRF-5 & tRF-3 both 641
tRNA genes generate tRF-5 & tRF-1 both 147
tRNA genes generate tRF-3 & tRF-1 both 153
tRNA genes generate tRF-5, tRF-3 & tRF-1 153



Number of tRFs predicted 219164
Total number of unique tRF sequences                                                       2923
Number of unique tRF-5 sequences 1382
Number of unique tRF-3 sequences 1278
Number of unique tRF-1 sequences 263

tRNA genes resulting in tRFs


Brachypodium distachyon


Total tRNA genes in genome 661
Total tRNA genes that generate tRFs 634
tRNA genes generate tRF-5 608
tRNA genes generate tRF-3 598
tRNA genes generate tRF-1 43
tRNA genes generate tRF-5 & tRF-3 both 572
tRNA genes generate tRF-5 & tRF-1 both 42
tRNA genes generate tRF-3 & tRF-1 both 42
tRNA genes generate tRF-5, tRF-3 & tRF-1 41



Number of tRFs predicted 13812
Total number of unique tRF sequences                                               847
Number of unique tRF-5 sequences 395
Number of unique tRF-3 sequences 421
Number of unique tRF-1 sequences 31

tRNA genes resulting in tRFs



Glycine max


Total tRNA genes in genome 738
Total tRNA genes that generate tRFs 715
tRNA genes generate tRF-5 701
tRNA genes generate tRF-3 703
tRNA genes generate tRF-1 93
tRNA genes generate tRF-5 & tRF-3 both 689
tRNA genes generate tRF-5 & tRF-1 both 90
tRNA genes generate tRF-3 & tRF-1 both 93
tRNA genes generate tRF-5, tRF-3 & tRF-1 90



Number of tRFs predicted 146694
Total number of unique tRF sequences                                                            1384
Number of unique tRF-5 sequences 595
Number of unique tRF-3 sequences 614
Number of unique tRF-1 sequences 139

tRNA genes resulting in tRFs


Medicago truncatula


Total tRNA genes in genome 726
Total tRNA genes that generate tRFs 584
tRNA genes generate tRF-5 566
tRNA genes generate tRF-3 470
tRNA genes generate tRF-1 28
tRNA genes generate tRF-5 & tRF-3 both 452
tRNA genes generate tRF-5 & tRF-1 both 28
tRNA genes generate tRF-3 & tRF-1 both 10
tRNA genes generate tRF-5, tRF-3 & tRF-1 10



Number of tRFs predicted 11980
Total number of unique tRF sequences                                              631
Number of unique tRF-5 sequences 396
Number of unique tRF-3 sequences 220
Number of unique tRF-1 sequences 15

tRNA genes resulting in tRFs


Oryza sativa


Total tRNA genes in genome 764
Total tRNA genes that generate tRFs 39
tRNA genes generate tRF-5 30
tRNA genes generate tRF-3 9
tRNA genes generate tRF-1 10
tRNA genes generate tRF-5 & tRF-3 both 9
tRNA genes generate tRF-5 & tRF-1 both 1
tRNA genes generate tRF-3 & tRF-1 both 1
tRNA genes generate tRF-5, tRF-3 & tRF-1 1



Number of tRFs predicted 2554
Total number of unique tRF sequences                          168
Number of unique tRF-5 sequences 111
Number of unique tRF-3 sequences 42
Number of unique tRF-1 sequences 15

tRNA genes resulting in tRFs


Physcomitrella patens


Total tRNA genes in genome 432
Total tRNA genes that generate tRFs 401
tRNA genes generate tRF-5 378
tRNA genes generate tRF-3 369
tRNA genes generate tRF-1 123
tRNA genes generate tRF-5 & tRF-3 both 346
tRNA genes generate tRF-5 & tRF-1 both 118
tRNA genes generate tRF-3 & tRF-1 both 119
tRNA genes generate tRF-5, tRF-3 & tRF-1 114



Number of tRFs predicted 5490
Total number of unique tRF sequences                            508
Number of unique tRF-5 sequences 189
Number of unique tRF-3 sequences 207
Number of unique tRF-1 sequences 112

tRNA genes resulting in tRFs


Populus trichocarpa


Total tRNA genes in genome 652
Total tRNA genes that generate tRFs 549
tRNA genes generate tRF-5 480
tRNA genes generate tRF-3 483
tRNA genes generate tRF-1 0
tRNA genes generate tRF-5 & tRF-3 both 414
tRNA genes generate tRF-5 & tRF-1 both 0
tRNA genes generate tRF-3 & tRF-1 both 0
tRNA genes generate tRF-5, tRF-3 & tRF-1 0



Number of tRFs predicted 3078
Total number of unique tRF sequences                            195
Number of unique tRF-5 sequences 107
Number of unique tRF-3 sequences 88
Number of unique tRF-1 sequences 0

tRNA genes resulting in tRFs


Sorghum bicolor


Total tRNA genes in genome 649
Total tRNA genes that generate tRFs 531
tRNA genes generate tRF-5 491
tRNA genes generate tRF-3 472
tRNA genes generate tRF-1 47
tRNA genes generate tRF-5 & tRF-3 both 434
tRNA genes generate tRF-5 & tRF-1 both 45
tRNA genes generate tRF-3 & tRF-1 both 40
tRNA genes generate tRF-5, tRF-3 & tRF-1 40



Number of tRFs predicted 5068
Total number of unique tRF sequences                          433
Number of unique tRF-5 sequences 226
Number of unique tRF-3 sequences 151
Number of unique tRF-1 sequences 56

tRNA genes resulting in tRFs


Vitis vinifera


Total tRNA genes in genome 609
Total tRNA genes that generate tRFs 479
tRNA genes generate tRF-5 456
tRNA genes generate tRF-3 392
tRNA genes generate tRF-1 29
tRNA genes generate tRF-5 & tRF-3 both 369
tRNA genes generate tRF-5 & tRF-1 both 28
tRNA genes generate tRF-3 & tRF-1 both 29
tRNA genes generate tRF-5, tRF-3 & tRF-1 28



Number of tRFs predicted 70599
Total number of unique tRF sequences                                              893
Number of unique tRF-5 sequences 476
Number of unique tRF-3 sequences 373
Number of unique tRF-1 sequences 44

tRNA genes resulting in tRFs


Zea mays


Total tRNA genes in genome 1202
Total tRNA genes that generate tRFs 196
tRNA genes generate tRF-5 166
tRNA genes generate tRF-3 57
tRNA genes generate tRF-1 63
tRNA genes generate tRF-5 & tRF-3 both 56
tRNA genes generate tRF-5 & tRF-1 both 34
tRNA genes generate tRF-3 & tRF-1 both                       26
tRNA genes generate tRF-5, tRF-3 & tRF-1 26



Number of tRFs predicted 9326
Total number of unique tRF sequences                              701
Number of unique tRF-5 sequences 407
Number of unique tRF-3 sequences 205
Number of unique tRF-1 sequences 89

tRNA genes resulting in tRFs