CoNCRAtlas


CoNCRAtlas ID CoMIRGB012
Mature miRNA sequence CCAAAAUGGACUUAGUUGCUA
Locus A04:80576342-80576523(+)
Alignment 
Displayed Location: CM018205.1:80576369-80576539 Strand: +
UACUUUGGUACCUAAACUUGGCAACUAUGUCCAUUUUGGUCCCUAAACUUGGUAAAUGUGAAAGUUUGAUAAUGUGGUAUUUUGAGAUUGUGCUGCAUAAUUAAAUCUUGAUGGAAUCCAAGUUCAGAGACCAAAAUGGACUUAGUUGCUAAGUUUAGCUACCUAAGUGGA
(((((((((((((((((((((((((((.(((((((((((((.((.(((((((....(((.((.(((((((.(((((((((.........))))))))).))))))).)).)))....))))))).)).))))))))))))).))))))))))))))).((((....)))).
..................................................................................................................................CCAAAAUGGACUUAGUUGCUA.................... gba-miRN1
....................GCAACUAUGUCCAUUUUGGUC.................................................................................................................................. gba-miRN1*
miRNA family miRN1

Expression profile

Tissue specificity indexOvule: 0.2607; root: 0.2265; shoot apical: 0.0706; fiber: 0.1395; all tissues: 0.3027 | Tau: 0.424

Additional Information


Overlapping Elements: No overlap molecule
Target lncRNA CoLNCGB18426, CoLNCGB18425, CoLNCGB18424, CoLNCGB18423, CoLNCGB18422, CoLNCGB18421, CoLNCGB18420, CoLNCGB27388, CoLNCGB27387, CoLNCGB15112
Target CDS GB_A08G0199, GB_A08G0198, GB_D08G0200, GB_A13G2252, GB_D04G0225, GB_A13G2305, GB_D13G2252, GB_D02G0683, GB_A13G1171, GB_D13G1000
sORF
Reference
PMID Title
0NA