CoNCRAtlas


CoNCRAtlas ID CoMIRGB055
Mature miRNA sequence UAGUGAGGAUGGGAAAUUUGU
Locus D01:5716320-5716409(-)
Alignment 
Displayed Location: CM018215.1:5716302-5716425 Strand: -
AAUCAUUUAGGUAUGGAAAGUAGUGAGGAUGGGAAAUUUGUUGAUCCAAAUGAUUGGUUUAGGAAAUUAAUCAUUUGAUUUACAAAUUUUUCAUCUUCACUCGUUUCCUGCUAAUAAGAUUAGG
.........((((.(((((..((((((((((((((((((((.((((.(((((((((((((...))))))))))))))))).))))))))))))))))))))..)))))))))...((((..(((
....................UAGUGAGGAUGGGAAAUUUGU................................................................................... gba-miR8646
...................................................................................AAAUUUUUCAUCUUCACUCGU.................... gba-miR8646*
miRNA family miR8646

Expression profile

Tissue specificity indexOvule: 0.001; root: 0.9469; shoot apical: 0.0389; fiber: 0.0119; all tissues: 0.0013 | Tau: 0.986

Additional Information


Overlapping Elements: No overlap molecule
Target lncRNA CoLNCGB20163, CoLNCGB20162, CoLNCGB20161, CoLNCGB20160, CoLNCGB20158, CoLNCGB20159, CoLNCGB20157, CoLNCGB20156, CoLNCGB09519, CoLNCGB09518
Target CDS GB_D05G3943, GB_D07G2546, GB_A10G1729, GB_D10G1257, GB_D12G0084, GB_D05G3946, GB_D05G3931, GB_D05G3934, GB_D08G1003, GB_D05G3909
sORF
Reference
PMID Title
0NA