CoNCRAtlas


CoNCRAtlas ID CoMIRGB073
Mature miRNA sequence UCUUUCCUACUCCUCCCAUUCC
Locus D04:47137309-47137437(-)
Alignment 
Displayed Location: CM018218.1:47137311-47137433 Strand: -
GAGUUGCCGGGAGUUUUUGGAAGUGGGAUGGGUGGAAAGAUUUGUAUUUUCUCUCUUGAUUUUCCAAGAAUGUAAAGCAAAUCUUUCCUACUCCUCCCAUUCCACUUAUUUCCAGUUCUUCCU
(((..((.((((((...(((((.(((((.((((((((((((((((.(((.(..(((((......)))))..).))))))))))))))).)))).))))))))))...)))))).)).))).))
.................................................................................UCUUUCCUACUCCUCCCAUUCC.................... gba-miR482f
....................AAGUGGGAUGGGUGGAAAGAUU................................................................................. gba-miR482f*
miRNA family miR482

Expression profile

Tissue specificity indexOvule: 0.4604; root: 0.1721; shoot apical: 0.1624; fiber: 0.182; all tissues: 0.0231 | Tau: 0.707

Additional Information


Overlapping Elements: No overlap molecule
Target lncRNA CoLNCGB02896, CoLNCGB02897, CoLNCGB27700, CoLNCGB27699, CoLNCGB27697, CoLNCGB27689, CoLNCGB27682, CoLNCGB09142, CoLNCGB09143, CoLNCGB09144
Target CDS GB_A07G1855, GB_D11G3215, GB_A11G3263, GB_A11G3213, GB_A12G2391, GB_D12G2400, GB_D05G3670, GB_A05G1250, GB_A09G0221, GB_A10G2410
sORF
Reference
PMID Title
0NA