CoNCRAtlas


CoNCRAtlas ID CoMIRGB062
Mature miRNA sequence ACUCUCCCUCAAGGGCUUCCCC
Locus D02:62075272-62075372(-)
Alignment 
Displayed Location: CM018216.1:62075255-62075391 Strand: -
AAUCAAGGCGUUUCUCGUUCACUCUCCCUCAAGGGCUUCCCCAACAUGACAUGCAUGGUGCUAGCUUAAUGCUGCCUGCAUAUGCAAAUGCUUGGCGAAGUCCUUAGGGGGGGGUGCAUGAGACAUUAUUGUCUUGU
...(((((((..((((((.((((((((((.(((((((((.(((((((....((((((.(((..((........))..))))))))).))).)))).))))))))).)))))))))).))))))......))))))).
....................ACUCUCCCUCAAGGGCUUCCCC............................................................................................... gba-miR477d
...............................................................................................CGAAGUCCUUAGGGGGGGGUGC.................... gba-miR477d*
miRNA family miR477

Expression profile

Tissue specificity indexOvule: 0.0556; root: 0.2545; shoot apical: 0.053; fiber: 0.6338; all tissues: 0.0032 | Tau: 0.8555

Additional Information


Overlapping Elements: No overlap molecule
Target lncRNA CoLNCGB10457, CoLNCGB10458, CoLNCGB11896, CoLNCGB13375, CoLNCGB13377, CoLNCGB13378, CoLNCGB13384, CoLNCGB25227, CoLNCGB24539, CoLNCGB24540
Target CDS GB_D09G2605, GB_A09G2771, GB_A01G1629, GB_D01G1791, GB_A04G0027, GB_D05G4063, GB_A01G2263, GB_D01G2349, GB_A05G3761, GB_D04G0693
sORF
Reference
PMID Title
0NA