CoNCRAtlas


CoNCRAtlas ID CoMIRGB061
Mature miRNA sequence ACUCUCCUUCAAAGGCUUCAU
Locus D02:61973077-61973190(-)
Alignment 
Displayed Location: CM018216.1:61973058-61973210 Strand: -
GAACAAGGCAGCUCGCAUGCACUCUCCUUCAAAGGCUUCAUCAGCCAACAUGUCAUUAUGUGCAAGAGCUUUAAUUAAUUAGCUCUUGCAAAUGGCGAAUUGCAUUGUGGGUGAACCCUUUGUUGGAGAGUCCAUGAGACAUGGCUUGAACUC
...((((.((..((.((((.(((((((..((((((.((((((.(((((..(((((((...((((((((((..........)))))))))))))))))..)))....)).)))))).))))))..))))))).)))).))..)).)))).))))
....................ACUCUCCUUCAAAGGCUUCAU................................................................................................................ gba-miR477c
................................................................................................................GAACCCUUUGUUGGAGAGUCC.................... gba-miR477c*
miRNA family miR477

Expression profile

Tissue specificity indexOvule: 0.016; root: 0.6638; shoot apical: 0.1428; fiber: 0.1723; all tissues: 0.0052 | Tau: 0.8734

Additional Information


Overlapping Elements: No overlap molecule
Target lncRNA CoLNCGB10457, CoLNCGB10458, CoLNCGB00266, CoLNCGB08494, CoLNCGB08495, CoLNCGB18110, CoLNCGB13068, CoLNCGB13065, CoLNCGB13064, CoLNCGB26852
Target CDS GB_A02G1873, GB_D03G0212, GB_D09G2605, GB_A09G2771, GB_A10G0965, GB_D10G1025, GB_A11G1561, GB_D11G1606, GB_A03G2492, GB_D02G2623
sORF
Reference
PMID Title
0NA