CoNCRAtlas


CoNCRAtlas ID CoMIRGB035
Mature miRNA sequence ACAGGGAACAGGCUGAGCAUG
Locus A11:10490390-10490506(-)
Alignment 
Displayed Location: CM018212.1:10490372-10490491 Strand: -
GAUGGGAGAGACAGACAAAGACAGGGAACAGGCUGAGCAUGGAUGGAUCUACCAACUGAUUCUGUUGUUUCUCCGCCCAUGCACUGCCUCUUCCCUGGCUCUGCCUCCUCCAUUUUUUUC
((((((.(((.((((......(((((((.((((.(.((((((.((((.....((((.......))))....)))).)))))).).)))).)))))))..)))).))).))))))))))))
....................ACAGGGAACAGGCUGAGCAUG............................................................................... gba-miR408
...............................................................................UGCACUGCCUCUUCCCUGGCU.................... gba-miR408*
miRNA family miR408

Expression profile

Tissue specificity indexOvule: 0.045; root: 0.7296; shoot apical: 0.0934; fiber: 0.0799; all tissues: 0.0521 | Tau: 0.9073

Additional Information


Overlapping Elements: No overlap molecule
Target lncRNA CoLNCGB09422, CoLNCGB10684, CoLNCGB22330, CoLNCGB22329, CoLNCGB22327, CoLNCGB22328, CoLNCGB22326, CoLNCGB02541, CoLNCGB26656, CoLNCGB21352
Target CDS GB_A05G2440, GB_D05G2445, GB_A04G1588, GB_D04G1971, GB_A01G2015, GB_D01G2108, GB_D09G1003, GB_D13G0719, GB_A10G2804, GB_D10G2762
sORF
Reference
PMID Title
0NA