CoNCRAtlas


CoNCRAtlas ID CoMIRGB057
Mature miRNA sequence AAGCUCAGGAGGGAUAGCGCC
Locus D01:62547034-62547154(+)
Alignment 
Displayed Location: CM018215.1:62547037-62547174 Strand: +
CCAGUAUGGAAGAAUCUGUUAAGCUCAGGAGGGAUAGCGCCAUGGAUGAUCCAUCUUUCAAGCUUUCAUGCAUGUAUGUUAUUUGAUCCUCAUAUAGCGCUAUCCAUCCUGAGUUUCAUCGGUUCUUCUUGCUUGCUG
..((((.(((((((((.((.((((((((((.(((((((((.(((((.((((.......((.((......)).))..........)))).)).))).))))))))).)))))))))).)).))))))))))))).((((
....................AAGCUCAGGAGGGAUAGCGCC................................................................................................. gba-miR390b
.................................................................................................CGCUAUCCAUCCUGAGUUUCA.................... gba-miR390b*
miRNA family miR390

Expression profile

Tissue specificity indexOvule: 0.0105; root: 0.0157; shoot apical: 0.0018; fiber: 0.3585; all tissues: 0.6135 | Tau: 0.8425

Additional Information


Overlapping Elements: No overlap molecule
Target lncRNA CoLNCGB20849, CoLNCGB20850, CoLNCGB05216, CoLNCGB05215, CoLNCGB09154, CoLNCGB05214, CoLNCGB07013, CoLNCGB07007, CoLNCGB12921, CoLNCGB07005
Target CDS GB_A11G3363, GB_A10G1523, GB_D10G1439, GB_A11G2790, GB_D11G2775, GB_A11G3544, GB_A08G2566, GB_A11G2902, GB_A11G2790, GB_D11G2775
sORF
Reference
PMID Title
0NA