CoNCRAtlas


CoNCRAtlas ID CoMIRGB112
Mature miRNA sequence UCUCGGAUCGGGCUUCAUUCC
Locus D13:51939442-51939713(+)
Alignment 
Displayed Location: CM018227.1:51939558-51939694 Strand: +
GAAGAAAAGAGGGUGUAAGGAAUGAAGUUUGAUCCAAGAUCCAUCCCUCCGUAAUGGUCUUUUCAUCAUUUUAUAACUUGAUGGUUCAUGGAUGGAUCUCGGAUCGGGCUUCAUUCCUCACGCCACGCUUUUCCUAC
...........(((((.((((((((((((((((((.((((((((((..((((((((((......))))))..........)))).....)))))))))).)))))))))))))))))).))))).))))))))))..
................................................................................................UCUCGGAUCGGGCUUCAUUCC.................... gba-miR166m
....................AAUGAAGUUUGAUCCAAGAUC................................................................................................ gba-miR166m*
miRNA family miR166

Expression profile

Tissue specificity indexOvule: 0.1611; root: 0.6177; shoot apical: 0.0336; fiber: 0.0465; all tissues: 0.1411 | Tau: 0.8453

Additional Information


Overlapping Elements: No overlap molecule
Target lncRNA CoLNCGB13038, CoLNCGB13040, CoLNCGB13041, CoLNCGB14106, CoLNCGB14105, CoLNCGB27744, CoLNCGB27743, CoLNCGB27741, CoLNCGB27736, CoLNCGB00665
Target CDS GB_A09G1508, GB_A03G0924, GB_A07G2170, GB_D03G0189, GB_A02G1891, GB_D09G1817, GB_A07G0528, GB_D13G1047, GB_A10G1965, GB_D10G1957
sORF
Reference
PMID Title
0NA