CoNCRAtlas


CoNCRAtlas ID CoMIRGB040
Mature miRNA sequence UCUCGGACCAGGCUUCAUUCC
Locus A11:87309957-87310112(+)
Alignment 
Displayed Location: CM018212.1:87309950-87310088 Strand: +
GAAGAAAAGAGGGUGUAUGGAAUGAAGUUUGAUCCAAGAUCCAAGAUCCAUCAAUCAUCUUUCUUUUCUAAGUCAUGAAUUAUGAUGAUAUUAAUGGAUCUCGGACCAGGCUUCAUUCCUCACACCAUGCUUUUCCAUU
...((((((..(((((..(((((((((((((.(((.(((((((......((((.((((..(((.............)))..)))))))).....))))))).))).)))))))))))))..)))))...))))))....
..................................................................................................UCUCGGACCAGGCUUCAUUCC.................... gba-miR166e
....................AAUGAAGUUUGAUCCAAGAUC.................................................................................................. gba-miR166e*
miRNA family miR166

Expression profile

Tissue specificity indexOvule: 0.7886; root: 0.0583; shoot apical: 0.0302; fiber: 0.1228; all tissues: 0.0001 | Tau: 0.933

Additional Information


Overlapping Elements: No overlap molecule
Target lncRNA CoLNCGB13038, CoLNCGB13040, CoLNCGB13041, CoLNCGB14106, CoLNCGB14105, CoLNCGB27744, CoLNCGB27743, CoLNCGB27741, CoLNCGB27736, CoLNCGB00665
Target CDS GB_A09G1508, GB_A01G2349, GB_D01G2423, GB_A09G1681, GB_D09G1527, GB_A03G0924, GB_A05G3613, GB_D04G0820, GB_D10G2642, GB_D03G0189
sORF
Reference
PMID Title
0NA