CoNCRAtlas


CoNCRAtlas ID CoMIRGB110
Mature miRNA sequence UUCCCGGAGGCCACCCAUUCCAG
Locus D12:9222134-9222342(+)
Alignment 
Displayed Location: CM018226.1:9222210-9222337 Strand: +
UGGAGCUACUGGAAAUUACAGGAAUGGGGUCUUUGGGAUGAACCAUUCGAAAGCUUUUCAUCGUUUUAGUCAUAAAUUGAAGUUCUUCCCGGAGGCCACCCAUUCCAGUGAUUUCCAGAGGCUUAUCC
..(((((.(((((((((((.((((((((((((((((((.((((..(((((((((........))))..........))))))))).))))))))))..)))))))).))))))))))).))))).)))
.....................................................................................UUCCCGGAGGCCACCCAUUCCAG.................... gba-miR1183b
....................GGAAUGGGGUCUUUGGGAUGA....................................................................................... gba-miR1183b*
miRNA family miR1183

Expression profile

Tissue specificity indexOvule: 0.0478; root: 0.303; shoot apical: 0.349; fiber: 0.0523; all tissues: 0.2479 | Tau: 0.5337

Additional Information


Overlapping Elements: No overlap molecule
Target lncRNA CoLNCGB10481, CoLNCGB11868, CoLNCGB26863, CoLNCGB26862, CoLNCGB26861, CoLNCGB26860, CoLNCGB26859, CoLNCGB26858, CoLNCGB26857, CoLNCGB26855
Target CDS GB_A11G1407, GB_D11G1452, GB_A11G3354, GB_D03G0745, GB_A07G0743, GB_A04G0829, GB_D07G1426, GB_A11G3359, GB_D10G1341, GB_A10G1618
sORF
Reference
PMID Title
0NA