CoNCRAtlas


CoNCRAtlas ID CoMIRGH237
Mature miRNA sequence AAUGGAGGAGUUGGAAAGAUU
Locus D13:38219005-38219213(+)
Alignment 
Displayed Location: D13:38219093-38219207 Strand: +
CCGCUUCUGAAAAUUUUUGGAAUGGAGGAGUUGGAAAGAUUUUGAAUUUUCUCUAUAUUUUAAUAAUGAAAUAUCUUUCCAAUUCCUCCCAUUCCACUGAUUUCCAGCACUUCCU
......(((.(((((..(((((((((((((((((((((((.((..(((................)))..)).))))))))))))))).))))))))..))))).))).......)
....................AAUGGAGGAGUUGGAAAGAUU.......................................................................... ghi-miR1404
.........................................................................UCUUUCCAAUUCCUCCCAUUCC.................... ghi-miR1404*
miRNA family miR1404

Expression profile

Tissue specificity indexovule: 0.0158; fiber: 0.8074; shoot apical: 0.0208; cotton boll: 0.066; leaf: 0.0051; anthers: 0.0849 | Tau: 0.9761

Additional Information


Overlapping Elements: No overlap molecule
Target lncRNA CoLNCGH49816, CoLNCGH49816, CoLNCGH03087, CoLNCGH41651, CoLNCGH01889, CoLNCGH01888, CoLNCGH42386, CoLNCGH42387, CoLNCGH42383, CoLNCGH42384
Target CDS Gh_D13G241000.1, Gh_A13G202100.1, Gh_A03G194800.1, Gh_D02G212000.1, Gh_A05G208800.1, Gh_D05G225700.1, Gh_D06G145300.1, Gh_D13G118600.1, Gh_A07G073400.1, Gh_D07G072600.1
sORF
Reference
PMID Title
No references available