| CoNCRAtlas ID | CoMIRGH236 |
|---|---|
| Mature miRNA sequence | UGAAGCUGCCAGCAUGAUCUA |
| Locus | D13:35311955-35312082(-) |
| Alignment | Displayed Location: D13:35311938-35312062 Strand: - UAGCAUGCACCACAGAGAGUUGAAGCUGCCAGCAUGAUCUAGUUAACCACCCCUCCAUUUUUAAACCUAUCAGGGAGAGAGACUAGAUCAUGUGGCAGCUUCAUCUGUCCAUGGCAGCAUGAUCA ((((((((.(((..((.((.(((((((((((.((((((((((((......((((.................)))).....))))))))))))))))))))))).)).))..)))..))))).... ....................UGAAGCUGCCAGCAUGAUCUA.................................................................................... ghi-miR167i .....................................................................................GAUCAUGUGGCAGCUUCAUC.................... ghi-miR167i* |
| miRNA family | miR167 |
Expression profile
| Tissue specificity index | ovule: 0.0161; fiber: 0.0576; shoot apical: 0.2055; ovule and fiber: 0.0572; cotyledon: 0.0003; cotton boll: 0.0068; callus: 0.0006; leaf: 0.397; anthers: 0.0601; hypocotyls: 0.1988 | Tau: 0.8481 |
|---|
Additional Information
Overlapping Elements:
| Target lncRNA | CoLNCGH06214, CoLNCGH28913, CoLNCGH28914, CoLNCGH06213, CoLNCGH06553, CoLNCGH06554, CoLNCGH06555, CoLNCGH06556, CoLNCGH06557, CoLNCGH06558 |
|---|
| Target CDS | Gh_A06G203700.1, Gh_D06G208800.1, Gh_D06G208800.2, Gh_D09G091900.1, Gh_A12G127900.1, Gh_A12G127900.2, Gh_D12G128200.1, Gh_D12G128200.2, Gh_A03G013500.1, Gh_A03G013300.1 |
|---|
| sORF |
|---|
| Reference | |
|---|---|
| PMID | Title |
| 29481843 | MicroRNA-target gene responses to root knot nematode (Meloidogyne incognita) infection in cotton (Gossypium hirsutum L.) |