| CoNCRAtlas ID | CoMIRGH233 |
|---|---|
| Mature miRNA sequence | CUGAAGUGUUUGGGGGAACUC |
| Locus | D13:13261145-13261227(-) |
| Alignment | Displayed Location: D13:13261126-13261247 Strand: - AAAGUCAGCUGUUCCCUGGAGUUCCCCUGAUCACUUCAUCGGGGCUAUUUUACAACCCUAGACACAGGGAAUUUGAUCCUACUGAAGUGUUUGGGGGAACUCUGGGAGAUAGUGGACACUGG (((((..(((....((((((((((((((((.(((((((..((((.((..((....((((......))))))..)).))))..))))))).))))))))))))))))(((((((((((.((.. .................................................................................CUGAAGUGUUUGGGGGAACUC.................... ghi-miR395e ....................GUUCCCCUGAUCACUUCAUCG................................................................................. ghi-miR395e* |
| miRNA family | miR395 |
Expression profile
| Tissue specificity index | ovule: 0.0048; fiber: 0.3674; shoot apical: 0.005; cotyledon: 0.2331; cotton boll: 0.1932; leaf: 0.0888; anthers: 0.028; seedlings: 0.0797 | Tau: 0.8279 |
|---|
Additional Information
Overlapping Elements:
| Target lncRNA | CoLNCGH51706, CoLNCGH01290, CoLNCGH18451, CoLNCGH01289, CoLNCGH05362, CoLNCGH07996, CoLNCGH07945, CoLNCGH07944, CoLNCGH43807, CoLNCGH43808 |
|---|
| Target CDS | Gh_A13G153900.1, Gh_D13G156900.1, Gh_A01G036600.1, Gh_D11G276200.1, Gh_D03G096300.1, Gh_A01G252400.1, Gh_A01G252400.2, Gh_D01G246600.1, Gh_D09G053600.1, Gh_A09G057300.1 |
|---|
| sORF |
|---|
| Reference | |
|---|---|
| PMID | Title |
| 29481843 | MicroRNA-target gene responses to root knot nematode (Meloidogyne incognita) infection in cotton (Gossypium hirsutum L.) |