| CoNCRAtlas ID | CoMIRGH231 |
|---|---|
| Mature miRNA sequence | UUGACAGAAGAUAGAGAGCAC |
| Locus | D12:61864901-61864988(-) |
| Alignment | Displayed Location: D12:61864884-61865008 Strand: - GGAGGCACUGGUGAUUGUUGUUGACAGAAGAUAGAGAGCACAGAUGAUGGUGUUGCCUAUGUGCAUGCAUCCCACUCCUUUGUGCUCUCUAUGCUUCUGUCAUCAUCACCUUUCAUAGCCCCUCU ((.(((...(((((....((.(((((((((((((((((((((((.(((((((((((......))).)))..))).)).)))))))))))))).))))))))).))))))).......)))))))) ....................UUGACAGAAGAUAGAGAGCAC.................................................................................... ghi-miR156p ...................................................................................GCUCUCUAUGCUUCUGUCAUCA.................... ghi-miR156p* |
| miRNA family | miR156 |
Expression profile
| Tissue specificity index | ovule: 0.0136; fiber: 0.0493; cotyledon: 0.924; callus: 0.0027; leaf: 0.009; anthers: 0.0015 | Tau: 0.9918 |
|---|
Additional Information
Overlapping Elements:
| Target lncRNA | CoLNCGH44573, CoLNCGH44572, CoLNCGH44573, CoLNCGH44572, CoLNCGH38244, CoLNCGH14404, CoLNCGH14403, CoLNCGH28903, CoLNCGH15626, CoLNCGH15625 |
|---|
| Target CDS | Gh_D01G171200.1, Gh_A03G148200.1, Gh_A03G148200.2, Gh_D02G166800.1, Gh_A01G173100.1, Gh_A01G173100.2, Gh_A01G173100.3, Gh_D04G208500.1, Gh_A04G164100.1, Gh_A11G360800.1 |
|---|
| sORF |
|---|
| Reference | |
|---|---|
| PMID | Title |
| 31138116 | Identification and profiling of upland cotton microRNAs at fiber initiation stage under exogenous IAA application |