| CoNCRAtlas ID | CoMIRGH223 |
|---|---|
| Mature miRNA sequence | UGAAGCUGCCAGCAUGAUCUA |
| Locus | D12:355974-356071(-) |
| Alignment | Displayed Location: D12:355959-356087 Strand: - GAAGUCUACAAGGGAAAAAGUGAAGCUGCCAGCAUGAUCUAUCUUCCGUUAGUAAGAUGCGGAUGCUAUAUUGCUAACCCUAGCUAGGUCAUGCUGCGACAGCCUCACUCCUUCCUACUUGGGGCCCAA (((((((.((((((((..(((((.(((((((((((((((((.((...((((((((...((....))....))))))))...)).)))))))))))).).)))).)))))..))))..)))))))).... ....................UGAAGCUGCCAGCAUGAUCUA........................................................................................ ghi-miR167h ......................................................................................GGUCAUGCUGCGACAGCCUCACU.................... ghi-miR167h* |
| miRNA family | miR167 |
Expression profile
| Tissue specificity index | ovule: 0.1188; fiber: 0.009; shoot apical: 0.6902; ovule and fiber: 0.0121; cotyledon: 0.0037; cotton boll: 0.0047; callus: 0.0006; leaf: 0.0676; anthers: 0.0933 | Tau: 0.9551 |
|---|
Additional Information
Overlapping Elements:
| Target lncRNA | CoLNCGH06214, CoLNCGH28913, CoLNCGH28914, CoLNCGH06213, CoLNCGH32636, CoLNCGH32635, CoLNCGH19449, CoLNCGH20919, CoLNCGH20920, CoLNCGH43891 |
|---|
| Target CDS | Gh_A06G099400.1, Gh_D06G098700.1, Gh_A12G108400.1, Gh_A05G330000.1, Gh_D04G077800.1, Gh_A05G055100.1, Gh_D05G071400.1, Gh_D13G024500.1, Gh_D09G255600.1, Gh_A13G022600.1 |
|---|
| sORF |
|---|
| Reference | |
|---|---|
| PMID | Title |
| 29481843 | MicroRNA-target gene responses to root knot nematode (Meloidogyne incognita) infection in cotton (Gossypium hirsutum L.) |