| CoNCRAtlas ID | CoMIRGH220 |
|---|---|
| Mature miRNA sequence | GAACGUUGUCUGGCCCGAGGA |
| Locus | D11:9298259-9298391(+) |
| Alignment | Displayed Location: D11:9298248-9298408 Strand: + AGGAGCUACUCUUUUGAGGGGAACGUUGUCUGGCCCGAGGACACCGGUUCCAUUUCCAUUUGCCUCUACGGAAGCUGUUCGUCACUUGGUUGUUAAAUGGUUUGAGCUUGUGCCGGUGUUGUCGGACCAGGCUUCAUUCCUCCCAAUUAUUGCUCCCAUAU (((((...))))))).)))((((.(..((((((.((((.(((((((((.......(((((((((...(((((.....))))).....)))....))))))...........))))))))).)))).))))))..).))))))))))))).((((....((( ....................GAACGUUGUCUGGCCCGAGGA........................................................................................................................ ghi-miRN40 ........................................................................................................................GUCGGACCAGGCUUCAUUCCU.................... ghi-miRN40* |
| miRNA family | miRN40 |
Expression profile
| Tissue specificity index | ovule: 0.0035; fiber: 0.0022; shoot apical: 0.0691; ovule and fiber: 0.0078; cotyledon: 0.0003; cotton boll: 0.0016; callus: 0.0012; leaf: 0.0058; anthers: 0.8888; hypocotyls: 0.0187; seedlings: 0.0008 | Tau: 0.9875 |
|---|
Additional Information
Overlapping Elements:
| Target lncRNA | CoLNCGH30892, CoLNCGH49394, CoLNCGH30891, CoLNCGH49395, CoLNCGH04460, CoLNCGH30892, CoLNCGH49394, CoLNCGH49395, CoLNCGH30891, CoLNCGH45906 |
|---|
| Target CDS | Gh_A05G118500.1, Gh_D05G130700.1, Gh_A08G089300.1, Gh_A13G137400.1, Gh_A07G025800.1, Gh_A05G090100.1, Gh_A06G103200.1, Gh_A08G225500.1, Gh_D05G049400.1, Gh_D05G102000.1 |
|---|
| sORF |
|---|
| Reference | |
|---|---|
| PMID | Title |
| No references available | |