| CoNCRAtlas ID | CoMIRGH216 |
|---|---|
| Mature miRNA sequence | UGUCGCAGGAGCGAUGGCACUG |
| Locus | D11:6089605-6089689(-) |
| Alignment | Displayed Location: D11:6089587-6089708 Strand: - ACUGGGGGUUGGGGGAAUCUUGUCGCAGGAGCGAUGGCACUGCCUUUUGUUUUUGUUUUCCUUGUAUAGCAACACAGGACAGUGCCUUCGGCCUGCGACAAGGUACCCUGCAACUUCUUUUA ...((((((((((((.(((((((((((((..(((.((((((((((..((((.((((.........)))).)))).))).))))))).))).))))))))))))).)))).)))))))).... ....................UGUCGCAGGAGCGAUGGCACUG................................................................................ ghi-miR3627d .................................................................................GUGCCUUCGGCCUGCGACAAG.................... ghi-miR3627d* |
| miRNA family | miR3627 |
Expression profile
| Tissue specificity index | fiber: 0.0555; shoot apical: 0.0076; cotyledon: 0.0252; cotton boll: 0.0058; callus: 0.1875; leaf: 0.0633; anthers: 0.0486; hypocotyls: 0.0099; seedlings: 0.5965 | Tau: 0.9324 |
|---|
Additional Information
Overlapping Elements:
| Target lncRNA | CoLNCGH49723, CoLNCGH36172, CoLNCGH03797, CoLNCGH03796, CoLNCGH03795, CoLNCGH03794, CoLNCGH34989, CoLNCGH34988, CoLNCGH34986, CoLNCGH34985 |
|---|
| Target CDS | Gh_A12G012200.1, Gh_D13G243400.1, Gh_A13G212800.1, Gh_D13G215800.1, Gh_D13G216000.1, Gh_A10G163700.1, Gh_D10G185500.1, Gh_A05G147100.1, Gh_D05G162700.1, Gh_D05G162700.3 |
|---|
| sORF |
|---|
| Reference | |
|---|---|
| PMID | Title |
| 25572837 | Small RNA sequencing identifies miRNA roles in ovule and fibre development |