CoNCRAtlas


CoNCRAtlas ID CoMIRGH212
Mature miRNA sequence UUCCAUGUCACAGAGAUGUUG
Locus D11:31380186-31380307(+)
Alignment 
Displayed Location: D11:31380176-31380312 Strand: +
CCUAUAUACUUCCUUUUCUUUUCCAUGUCACAGAGAUGUUGUGUAGGCCAUUUCAAAUCGUUUCUCUGCUCAGAAAUUAAUAGUCAGGAAGCAUCAACAUCUUUGUGAUAUGGAAAAGAAGAUGAAGGAGUAUUUAA
...((((.((((.(((((((((((((((((((((((((((((((...((..........((((((......)))))).........))..))).)))))))))))))))))))))))))))).))))..))))....
....................UUCCAUGUCACAGAGAUGUUG................................................................................................ ghi-miR8768
................................................................................................ACAUCUUUGUGAUAUGGAAAA.................... ghi-miR8768*
miRNA family miR8768

Expression profile

Tissue specificity indexovule: 0.0696; fiber: 0.0301; shoot apical: 0.1013; ovule and fiber: 0.2076; cotyledon: 0.0685; cotton boll: 0.0514; callus: 0.0417; leaf: 0.0941; anthers: 0.2275; hypocotyls: 0.0446; seedlings: 0.0636 | Tau: 0.6605

Additional Information


Overlapping Elements: No overlap molecule
Target lncRNA CoLNCGH40466, CoLNCGH40465, CoLNCGH16363, CoLNCGH16362, CoLNCGH16361, CoLNCGH16363, CoLNCGH16360, CoLNCGH16359, CoLNCGH16362, CoLNCGH16361
Target CDS Gh_A05G094400.1, Gh_D05G106600.1, Gh_D10G006100.1, Gh_Contig01033_ERROPOS3049310+G003900.1, Gh_A07G195900.1, Gh_D07G194100.1, Gh_A06G071200.1, Gh_D06G069500.1, Gh_A10G008600.1, Gh_D10G018400.1
sORF
Reference
PMID Title
No references available