CoNCRAtlas


CoNCRAtlas ID CoMIRGH206
Mature miRNA sequence UGGAGAAGCAGGGCACGUGCA
Locus D11:11053499-11053625(+)
Alignment 
Displayed Location: D11:11053499-11053631 Strand: +
GUGGGUGCGUAGCUCCUUGUUGGAGAAGCAGGGCACGUGCAGAAAGUGCUUGAAUUGGUGCCACAUAUAUCAUAUAUAUAUAUCACCUUCUGCACGUGCUCCCUUUCUCCAACAUGGGUUCCUCACCUUAUUA
(((((.(...(((.((.(((((((((((..((((((((((((((............((((....((((((...))))))....))))))))))))))))))..))))))))))).)))))))))))).)).))
....................UGGAGAAGCAGGGCACGUGCA............................................................................................ ghi-miR164c
............................................................................................CACGUGCUCCCUUUCUCCAAC.................... ghi-miR164c*
miRNA family miR164

Expression profile

Tissue specificity indexovule: 0.0008; fiber: 0.0009; shoot apical: 0.9644; cotyledon: 0.0012; cotton boll: 0.0005; callus: 0.0015; leaf: 0.0193; anthers: 0.0111; hypocotyls: 0.0001; seedlings: 0.0002 | Tau: 0.9963
Tissue
Developmental Stage
Treatment

Additional Information


Overlapping Elements: No overlap molecule
Target lncRNA CoLNCGH18449, CoLNCGH18449, CoLNCGH41710, CoLNCGH17400, CoLNCGH35940, CoLNCGH49910, CoLNCGH35939, CoLNCGH17399, CoLNCGH17398, CoLNCGH17397
Target CDS Gh_A11G035600.1, Gh_D11G035900.1, Gh_A12G201000.1, Gh_D12G194500.1, Gh_D13G169000.1, Gh_A13G167200.1, Gh_A11G324400.1, Gh_D11G325000.1, Gh_A01G060000.1, Gh_D01G053800.1
sORF
Reference
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PMID Title