| CoNCRAtlas ID | CoMIRGH206 |
|---|---|
| Mature miRNA sequence | UGGAGAAGCAGGGCACGUGCA |
| Locus | D11:11053499-11053625(+) |
| Alignment | Displayed Location: D11:11053499-11053631 Strand: + GUGGGUGCGUAGCUCCUUGUUGGAGAAGCAGGGCACGUGCAGAAAGUGCUUGAAUUGGUGCCACAUAUAUCAUAUAUAUAUAUCACCUUCUGCACGUGCUCCCUUUCUCCAACAUGGGUUCCUCACCUUAUUA (((((.(...(((.((.(((((((((((..((((((((((((((............((((....((((((...))))))....))))))))))))))))))..))))))))))).)))))))))))).)).)) ....................UGGAGAAGCAGGGCACGUGCA............................................................................................ ghi-miR164c ............................................................................................CACGUGCUCCCUUUCUCCAAC.................... ghi-miR164c* |
| miRNA family | miR164 |
Expression profile
| Tissue specificity index | ovule: 0.0008; fiber: 0.0009; shoot apical: 0.9644; cotyledon: 0.0012; cotton boll: 0.0005; callus: 0.0015; leaf: 0.0193; anthers: 0.0111; hypocotyls: 0.0001; seedlings: 0.0002 | Tau: 0.9963 |
|---|
Additional Information
Overlapping Elements:
| Target lncRNA | CoLNCGH18449, CoLNCGH18449, CoLNCGH41710, CoLNCGH17400, CoLNCGH35940, CoLNCGH49910, CoLNCGH35939, CoLNCGH17399, CoLNCGH17398, CoLNCGH17397 |
|---|
| Target CDS | Gh_A11G035600.1, Gh_D11G035900.1, Gh_A12G201000.1, Gh_D12G194500.1, Gh_D13G169000.1, Gh_A13G167200.1, Gh_A11G324400.1, Gh_D11G325000.1, Gh_A01G060000.1, Gh_D01G053800.1 |
|---|
| sORF |
|---|
| Reference | |
|---|---|
| PMID | Title |
| 25572837 | Small RNA sequencing identifies miRNA roles in ovule and fibre development |