CoNCRAtlas



CoNCRAtlas ID CoMIRGH205
Mature miRNA sequence UUAGAUUCACGCACAAACUCG
Locus D11:10390248-10390341(-)
Alignment
Displayed Location: D11:10390233-10390361 Strand: -
AAAAGAGGAGGCAUAUUUCAGGUUUGUGUAUGAAUCUGAUAAAACCAUAAGCUAGAAAAAGAAGAUGGAAAGGUGGAUUUGUUUCAUGUUAGAUUCACGCACAAACUCGUAAUCUGUCUUUUCAUUUCA
....(((((((((.(((.(.(((((((((.((((((((((....((((...((......))...))))....(((((.....))))))))))))))).))))))))).).))).)))))))))......
........................................................................................UUAGAUUCACGCACAAACUCG.................... ghi-miR403c
....................GGUUUGUGUAUGAAUCUGAUA........................................................................................ ghi-miR403c*
miRNA family miR403

Expression profile

Tissue specificity indexfiber: 0.0319; shoot apical: 0.0007; cotyledon: 0.0199; cotton boll: 0.0487; callus: 0.2013; leaf: 0.5042; anthers: 0.0534; seedlings: 0.1398 | Tau: 0.9017
Tissue
Developmental Stage
Treatment

Additional Information


Overlapping Elements:
ChromosomeStartEndStrandMolecule
D111038896210390484-CoLNCGH15609
D111038897010390484-CoLNCGH15610
D111038900210390484-CoLNCGH15611
D111038902310390484-CoLNCGH15612
D111038722010390484-CoLNCGH15608
Target lncRNA CoLNCGH18393, CoLNCGH43637, CoLNCGH43638, CoLNCGH43639, CoLNCGH43640, CoLNCGH18391, CoLNCGH18392, CoLNCGH43345, CoLNCGH43344, CoLNCGH41393
Target CDS Gh_A05G329600.1, Gh_D04G077200.1, Gh_D10G044100.1, Gh_D05G151400.1, Gh_A05G136400.1, Gh_D06G211500.1, Gh_A03G235900.1, Gh_D11G011300.1, Gh_A11G011200.1, Gh_Contig00963G000100.1
sORF
Reference
PMID Title
0NA