| CoNCRAtlas ID | CoMIRGH203 |
|---|---|
| Mature miRNA sequence | AGAAUCCUGAUGAUGCUGCAG |
| Locus | D10:62983424-62983556(+) |
| Alignment | Displayed Location: D10:62983438-62983570 Strand: + GACAGUCACUGUUUGCUGUUGGAGCAUCAUCAAGAUUCACAAUUUUAGGGUUCUUUUUUGAUUGAUUUGAUCAAUCAGCCUUUUUAUGAUUGAGAAUCCUGAUGAUGCUGCAGUGGCAAUAAGUGGCUAAAUA ...(((((((..(((((((((.((((((((((.(((((.(((((..(((((.......((((((((...))))))))))))).....))))).))))).)))))))))).)))))))))..)))))))..... ............................................................................................AGAAUCCUGAUGAUGCUGCAG.................... ghi-miR172k ....................GGAGCAUCAUCAAGAUUCACA............................................................................................ ghi-miR172k* |
| miRNA family | miR172 |
Expression profile
| Tissue specificity index | ovule: 0.6925; fiber: 0.03; shoot apical: 0.0025; ovule and fiber: 0.0004; cotton boll: 0.2746 | Tau: 0.9556 |
|---|
Additional Information
Overlapping Elements:
| Target lncRNA | CoLNCGH19317, CoLNCGH19318, CoLNCGH14894, CoLNCGH44731, CoLNCGH44732, CoLNCGH44733, CoLNCGH10465, CoLNCGH10464, CoLNCGH10463, CoLNCGH10461 |
|---|
| Target CDS | Gh_A08G001700.1, Gh_D08G002300.1, Gh_D10G236700.1, Gh_A01G243500.1, Gh_D01G237900.1, Gh_A03G047000.1, Gh_A05G087000.1, Gh_D05G098700.1, Gh_A10G213200.1, Gh_A10G079700.1 |
|---|
| sORF |
|---|
| Reference | |
|---|---|
| PMID | Title |
| 32074966 | Different MicroRNA Families Involved in Regulating High Temperature Stress Response during Cotton ( Gossypium hirsutum L.) Anther Development |