CoNCRAtlas



CoNCRAtlas ID CoMIRGH200
Mature miRNA sequence UUAGGCCAUCGGAAAUUGCUCC
Locus D10:54218114-54218212(-)
Alignment
Displayed Location: D10:54218106-54218228 Strand: -
CUCCUUGUCUCUAGAGGACCUUAGGCCAUCGGAAAUUGCUCCAACCUCCAUAGACAUCGCAACAAGUAAUCGAGGAGGUCAGAGCGAUUCUGGUGGCCUGAGGUCCUCUAGACACAUAAAAGA
)))..(((.(((((((((((((((((((((((((.((((((..((((((...((...(.......)...))..))))))..))))))))))))))))))))))))))))))).))).......
....................UUAGGCCAUCGGAAAUUGCUCC................................................................................. ghi-miRN37
..................................................................................AGCGAUUCUGGUGGCCUGAGG.................... ghi-miRN37*
miRNA family miRN37

Expression profile

Tissue specificity indexovule: 0.0962; fiber: 0.6009; shoot apical: 0.0012; ovule and fiber: 0.0024; cotyledon: 0.0057; cotton boll: 0.213; callus: 0.0467; leaf: 0.0137; anthers: 0.0069; hypocotyls: 0.0085; seedlings: 0.0049 | Tau: 0.9336
Tissue
Developmental Stage
Treatment

Additional Information


Overlapping Elements:
ChromosomeStartEndStrandMolecule
D105421703954219679-CoLNCGH14569
D105421706554221082-CoLNCGH14570
Target lncRNA CoLNCGH08389, CoLNCGH33694, CoLNCGH06752, CoLNCGH06751, CoLNCGH14569, CoLNCGH06750, CoLNCGH14570, CoLNCGH33704, CoLNCGH01897, CoLNCGH12500
Target CDS Gh_D01G168400.1, Gh_A07G047900.2, Gh_A07G047900.1, Gh_A05G173200.1, Gh_A06G173000.1, Gh_D06G174900.1, Gh_Contig00374G002300.1, Gh_A03G057100.1, Gh_D03G139600.1, Gh_A08G258000.1
sORF
Reference
PMID Title
0NA