| CoNCRAtlas ID | CoMIRGH198 |
|---|---|
| Mature miRNA sequence | UCGGACUAGGCUUCAUUCCCC |
| Locus | D10:40942286-40942374(-) |
| Alignment | Displayed Location: D10:40942269-40942388 Strand: - UAAAUAUUAACAAGUUGAGGGGAAUGUUGUCUGGUUCGAGACAAUUCAAUUCGAAGUUCGAGGCUUCAUCUGAACGAUUUCGGACUAGGCUUCAUUCCCCUCAACUAGGGUAAAUAUAUC ............((((((((((((((..(((((((((((((...((((..(.((((((...)))))))..))))...)))))))))))))..)))))))))))))))))).......... ...............................................................................UCGGACUAGGCUUCAUUCCCC.................... ghi-miR166l ....................GGAAUGUUGUCUGGUUCGAGA............................................................................... ghi-miR166l* |
| miRNA family | miR166 |
Expression profile
| Tissue specificity index | ovule: 0.1015; fiber: 0.092; shoot apical: 0.1931; ovule and fiber: 0.0632; cotyledon: 0.0364; cotton boll: 0.0864; callus: 0.0413; leaf: 0.1682; anthers: 0.0266; hypocotyls: 0.1457; seedlings: 0.0458 | Tau: 0.5821 |
|---|
Additional Information
Overlapping Elements:
| Target lncRNA | CoLNCGH30892, CoLNCGH30892, CoLNCGH49394, CoLNCGH49394, CoLNCGH49395, CoLNCGH30891, CoLNCGH30891, CoLNCGH49395, CoLNCGH42023, CoLNCGH04460 |
|---|
| Target CDS | Gh_A05G118500.1, Gh_D05G130700.1, Gh_A08G089300.1, Gh_A13G137400.1, Gh_A12G088500.1, Gh_A07G025800.1, Gh_A05G090100.1, Gh_A06G103200.1, Gh_A08G225500.1, Gh_D05G049400.1 |
|---|
| sORF |
|---|
| Reference | |
|---|---|
| PMID | Title |
| No references available | |