CoNCRAtlas


CoNCRAtlas ID CoMIRGH195
Mature miRNA sequence UCUGUCGCAGGGGAGAUGGCUG
Locus D09:6687852-6687962(-)
Alignment 
Displayed Location: D09:6687856-6687978 Strand: -
AUCAUGGGUUCAGGCGGGGUUCUGUCGCAGGGGAGAUGGCUGGUCCAUUCAUGCCUAUGCUAUGCCAAUUAUGUAUGCAUCAGGCAUCUCACCGCGCCAGAACUCCAUCCAAUCCAUCCCAAU
...(((((((..((.(((((((((.(((.((.((((((.(((((.(((.((((.....((...))....)))).))).))))).)))))).))))).))))))))).)).))))))).....)
....................UCUGUCGCAGGGGAGAUGGCUG................................................................................. ghi-miR3267b
..................................................................................GGCAUCUCACCGCGCCAGAAC.................... ghi-miR3267b*
miRNA family miR3267

Expression profile

Tissue specificity indexfiber: 0.2226; shoot apical: 0.3119; ovule and fiber: 0.0288; cotyledon: 0.0001; leaf: 0.1561; anthers: 0.1813; hypocotyls: 0.0991 | Tau: 0.7794

Additional Information


Overlapping Elements: No overlap molecule
Target lncRNA CoLNCGH07535, CoLNCGH07536, CoLNCGH07537, CoLNCGH07538, CoLNCGH07531, CoLNCGH07544, CoLNCGH07546, CoLNCGH07548, CoLNCGH35031, CoLNCGH35032
Target CDS Gh_A06G012600.1, Gh_A13G092600.1, Gh_D13G113000.1, Gh_A05G355000.1, Gh_A03G040200.1, Gh_A03G040200.2, Gh_D03G157200.1, Gh_D10G015900.1, Gh_D10G015900.2, Gh_D05G316200.1
sORF
Reference
PMID Title
No references available