CoNCRAtlas



CoNCRAtlas ID CoMIRGH194
Mature miRNA sequence UUGUGAUGUUUGUGAGGAACA
Locus D09:6329153-6329271(-)
Alignment
Displayed Location: D09:6329147-6329284 Strand: -
AUUCAUAUAGCUACCUUUUUUUCCUCACAAAUAUCACAAUACCUAUCUCUAGUCUACUGCAUUCAUUUUCGAAUUUGAAUUGGUUUGGGUUUUAUUAUUGUGAUGUUUGUGAGGAACAAAAGGUACUGAUAUGAAGCG
.(((((((((.((((((((.(((((((((((((((((((((......(((((...((((.(((((..........))))))))))))))......))))))))))))))))))))).)))))))))).)))))))..)
.................................................................................................UUGUGAUGUUUGUGAGGAACA.................... ghi-miR1474d
....................UUCCUCACAAAUAUCACAAUA................................................................................................. ghi-miR1474d*
miRNA family miR1474

Expression profile

Tissue specificity indexovule: 0.2074; fiber: 0.0482; shoot apical: 0.0053; ovule and fiber: 0.0444; cotyledon: 0.1556; cotton boll: 0.1107; callus: 0.0485; leaf: 0.1783; anthers: 0.0159; hypocotyls: 0.01; seedlings: 0.1757 | Tau: 0.6177
Tissue
Developmental Stage
Treatment

Additional Information


Overlapping Elements: No overlap molecule
Target lncRNA CoLNCGH34442, CoLNCGH34443, CoLNCGH03667, CoLNCGH10949, CoLNCGH10950, CoLNCGH10951, CoLNCGH10952, CoLNCGH10953, CoLNCGH40055, CoLNCGH40053
Target CDS Gh_A13G006600.1, Gh_D06G206800.1, Gh_D06G207600.1, Gh_D06G201700.1, Gh_Contig00291G000100.1, Gh_D06G207000.1, Gh_D06G206100.1, Gh_D06G201800.1, Gh_D13G008600.1, Gh_A13G008600.1
sORF
Reference
PMID Title
0NA