CoNCRAtlas


CoNCRAtlas ID CoMIRGH193
Mature miRNA sequence UUGUGAUAUUAGUGAGGAACA
Locus D09:6306748-6306999(-)
Alignment 
Displayed Location: D09:6306783-6306926 Strand: -
AAUCAUAUUCUUACCUUCUUUUCUUCACAAAUAUCACAAUAAAACAUGGAUGAAACUAUCGAUGCCCUAAGCUGCUUCUUGUAUCGAUGAUAGAGUUCUAUUAUUGUGAUAUUAGUGAGGAACAAAAGGUACUGAUAUGAGGCC
..(((((((..((((((...((((((((.(((((((((((((.....((((.....(((((((((...(((...)))...))))))))).....))))..))))))))))))).))))))))...))))))..)))))))..((
.......................................................................................................UUGUGAUAUUAGUGAGGAACA.................... ghi-miR1474c
....................UUCUUCACAAAUAUCACAAUA....................................................................................................... ghi-miR1474c*
miRNA family miR1474

Expression profile

Tissue specificity indexovule: 0.0826; fiber: 0.0584; shoot apical: 0.0639; ovule and fiber: 0.0673; cotyledon: 0.0103; cotton boll: 0.0621; callus: 0.1242; leaf: 0.4047; anthers: 0.064; hypocotyls: 0.0619; seedlings: 0.0005 | Tau: 0.8529

Additional Information


Overlapping Elements: No overlap molecule
Target lncRNA CoLNCGH03667, CoLNCGH03666, CoLNCGH03665, CoLNCGH40236, CoLNCGH40237, CoLNCGH40235, CoLNCGH40245, CoLNCGH40244, CoLNCGH40243, CoLNCGH40242
Target CDS Gh_D05G294600.1, Gh_A13G006600.1, Gh_D06G206800.1, Gh_A10G215200.1, Gh_D10G238700.1, Gh_A02G016600.1, Gh_A02G016100.1, Gh_D02G023100.1, Gh_D02G018500.1, Gh_A02G016200.1
sORF
Reference
PMID Title
No references available