| CoNCRAtlas ID | CoMIRGH186 |
|---|---|
| Mature miRNA sequence | AAGGACUGAAAGGAGUGAGGA |
| Locus | D09:40824623-40824745(-) |
| Alignment | Displayed Location: D09:40824608-40824761 Strand: - UUUUUGGCUUUGCUUGUAUGAAGGACUGAAAGGAGUGAGGAUGGAAAAUUUGUUAAGAUCCAUACCACUUUCCUACUUUAUAGCUUAACCAUUAGAUUAACAAAUUUUCUGUCCUCGCUCCUUUCUGUCCAUCAUACCAUGCAGAGCCUUCAAG ((...((((((((..((((((.((((.(((((((((((((((((((((((((((((........................................))))))))))))))))))))))))))))).)))).))))))...))))))))...))) ....................AAGGACUGAAAGGAGUGAGGA................................................................................................................. ghi-miRN35 .................................................................................................................CUCGCUCCUUUCUGUCCAUCA.................... ghi-miRN35* |
| miRNA family | miRN35 |
Expression profile
| Tissue specificity index | ovule: 0.0768; fiber: 0.1312; shoot apical: 0.071; ovule and fiber: 0.0324; cotyledon: 0.0936; cotton boll: 0.0745; callus: 0.0747; leaf: 0.1088; anthers: 0.0759; hypocotyls: 0.1664; seedlings: 0.0947 | Tau: 0.4992 |
|---|
Additional Information
Overlapping Elements:
| Target lncRNA | CoLNCGH08818, CoLNCGH46770, CoLNCGH17161, CoLNCGH31822, CoLNCGH31821, CoLNCGH31820, CoLNCGH19058, CoLNCGH19057, CoLNCGH19059, CoLNCGH06091 |
|---|
| Target CDS | Gh_D08G263900.1, Gh_A08G273500.1, Gh_A05G020800.1, Gh_A01G073500.1, Gh_D01G069200.1, Gh_A12G151300.1, Gh_D12G150600.1, Gh_A03G013900.1, Gh_D03G181900.1, Gh_D03G181900.2 |
|---|
| sORF |
|---|
| Reference | |
|---|---|
| PMID | Title |
| No references available | |